Publications 2026

Willoch-Allen K, Zhao Z, Ayuda-Durán P, Mikaeloff F, Struyf N, Österroos A, Lehmann S, Kallioniemi O, Saarela J, Tyner JW, Erkers T, Enserink JM, Aittokallio T (2026)
A multi-center study on the consistency of drug sensitivity testing in patients with acute myeloid leukemia
NPJ Precis Oncol (in press)
DOI 10.1038/s41698-026-01480-4, PubMed 42135420

Publications 2025

Romero-Becerra R, Zhao Z, Nebdal D, Müller E, Bergholtz H, Norum JH, Aittokallio T (2025)
Improved analysis of in vivo drug combination experiments with a comprehensive statistical framework and web-tool
Nat Commun, 16 (1), 10151
DOI 10.1038/s41467-025-65218-9, PubMed 41258298

Publications 2024

Ankill J, Zhao Z, Tekpli X, Kure EH, Kristensen VN, Mathelier A, Fleischer T (2024)
Integrative pan-cancer analysis reveals a common architecture of dysregulated transcriptional networks characterized by loss of enhancer methylation
PLoS Comput Biol, 20 (11), e1012565
DOI 10.1371/journal.pcbi.1012565, PubMed 39556603

Farooqi SJ, Zhao Z, Öjlert ÅK, Thunold S, Juul HV, Bjaanæs MM, Horndalsveen H, Nymoen HMG, Helland Å, Haakensen VD (2024)
Serum cytokines as a biomarker for immune checkpoint inhibitor toxicity in patients with pleural mesothelioma
Front Immunol, 15, 1480183
DOI 10.3389/fimmu.2024.1480183, PubMed 39687621

Sommen SL, Zhao Z, Segtnan S, Stiansen-Sonerud T, Selvakumar J, Beier Havdal L, Gjerstad J, Wyller VBB, Lund Berven L (2024)
Bulk RNA sequencing for analysis of post COVID-19 condition in adolescents and young adults
J Transl Med, 22 (1), 312
DOI 10.1186/s12967-024-05117-7, PubMed 38532465

Zhao Z, Zobolas J, Zucknick M, Aittokallio T (2024)
Tutorial on survival modeling with applications to omics data
Bioinformatics, 40 (3)
DOI 10.1093/bioinformatics/btae132, PubMed 38445722

Publications 2023

Wu Y, Wang Z, Zhao Z, Song X, Miao M, Zhang X (2023)
Bile acid metabolites in early pregnancy and risk of gestational diabetes mellitus: Results from a prospective cohort study
Diabetes Obes Metab, 25 (8), 2255-2267
DOI 10.1111/dom.15104, PubMed 37161712

Publications 2022

Zhao Z, Wang S, Zucknick M, Aittokallio T (2022)
Tissue-specific identification of multi-omics features for pan-cancer drug response prediction
iScience, 25 (8), 104767
DOI 10.1016/j.isci.2022.104767, PubMed 35992090

Zhao Z, Zucknick M, Aittokallio T (2022)
EnrichIntersect: an R package for custom set enrichment analysis and interactive visualization of intersecting sets
Bioinform Adv, 2 (1), vbac073
DOI 10.1093/bioadv/vbac073, PubMed 36699400

Publications 2021

Zhao Z, Banterle M, Bottolo L, Richardson S, Lewin A, Zucknick M (2021)
BayesSUR: An R Package for High-Dimensional Multivariate Bayesian Variable and Covariance Selection in Linear Regression
J. Stat. Softw., 100 (11), 1-32
DOI 10.18637/jss.v100.i11

Publications 2020

Gao Y, Zhao Z, Chen Y, Mahara G, Huang J, Lin Z, Zhang J (2020)
Automatic epileptic seizure classification in multichannel EEG time series with linear discriminant analysis
Technol Health Care, 28 (1), 23-33
DOI 10.3233/THC-181548, PubMed 31282443

Mai TT, Rønneberg L, Zhao Z, Zucknick M, Corander J (2020)
Learning Cancer Drug Sensitivities in Large-Scale Screens from Multi-omics Data with Local Low-Rank Structure
Lecture Notes in Computer Science (LNCS), 12313, 67-79
DOI 10.1007/978-3-030-63061-4_7, PublikaID 380

Zhao Z, Zucknick M (2020)
Structured penalized regression for drug sensitivity prediction
J. R. Stat. Soc. Ser. C-Appl. Stat., 69 (3), 525-545
DOI 10.1111/rssc.12400

Publications 2017

Pan H, Shi X, Xiao D, He J, Zhang Y, Liang W, Zhao Z, Guo Z, Zou X, Zhang J, He J (2017)
Nomogram prediction for the survival of the patients with small cell lung cancer
J. Thorac. Dis., 9, 507
DOI 10.21037/jtd.2017.03.121, PublikaID 382

Zhang J, Zhao Z, Xue Y, Chen Z, Ma X, Zhou Q (2017)
Time series analysis
In Handbook of Medical Statistics (Fang J, ed.), World Scientific Publishing, 269-299
DOI 10.1142/9789813148963_0009, PublikaID 381, ISBN 978-9813148956

Publications 2016

Lin Y, Lin H, Lin Q, Zhang J, Zhu P, Lu Y, Zhao Z, Lv J, Lee MK, Xu Y (2016)
A novel three-dimensional smile analysis based on dynamic evaluation of facial curve contour
Sci. Rep., 6, 22103
DOI 10.1038/srep22103, PublikaID 383