OUH - Projects for Students

Available Projects

Are you considering an internship or pursuing your Master's Thesis with us? We are currently offering several projects for students. We are based in Oslo, but the work can also be done remotely. To apply for a project, follow the steps outlined in the Contact section within each available project file in the table below. Feel free to apply for multiple projects, but rank them according to your preferences.

- No projects currently available -

Previous Projects

Project	Supervisors
Optimizing clustering metrics for patient stratification using heuristic approaches	Main: John Zobolas Co-supervisors: Alberto López, Thomas Fleischer, Tero Aittokallio
Incomplete multi-modal clustering algorithms review and benchmarking	Main: Alberto López Co-supervisors: Thomas Fleischer, Tero Aittokallio
Ensemble boolean modeling pipeline for explaining drug combination synergy predictions	Main: John Zobolas Co-supervisors: Åsmund Flobak, Tero Aittokallio

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Recent publications

Ianevski A, Nader K, Driva K, Senkowski W, Bulanova D, Moyano-Galceran L, Ruokoranta T, Kuusanmäki H, Ikonen N, Sergeev P, Vähä-Koskela M, Giri AK, Vähärautio A, Kontro M, Porkka K, Pitkänen E, Heckman CA, Wennerberg K, Aittokallio T (2024)
Single-cell transcriptomes identify patient-tailored therapies for selective co-inhibition of cancer clones
Nat Commun, 15 (1), 8579
DOI 10.1038/s41467-024-52980-5, PubMed 39362905

Schulman A, Rousu J, Aittokallio T, Tanoli Z (2024)
Attention-based approach to predict drug-target interactions across seven target superfamilies
Bioinformatics, 40 (8)
DOI 10.1093/bioinformatics/btae496, PubMed 39115379

Ianevski A, Kushnir A, Nader K, Miihkinen M, Xhaard H, Aittokallio T, Tanoli Z (2024)
RepurposeDrugs: an interactive web-portal and predictive platform for repurposing mono- and combination therapies
Brief Bioinform, 25 (4)
DOI 10.1093/bib/bbae328, PubMed 38980370