Selected Publications

Selected Publications

  1. Ianevski A, Lahtela J, Javarappa KK, Sergeev P, Ghimire BR, Gautam P, Vähä-Koskela M, Turunen L, Linnavirta N, Kuusanmäki H, Kontro M, Porkka K, Heckman CA, Mattila P, Wennerberg K, Giri AK, Aittokallio T.  Patient-tailored design for selective co-inhibition of leukemic cell subpopulations. Science Advances 2020; 7: eabe4038, DOI: 10.1126 / sciadv.abe4038
  2. Julkunen H, Cichonska A, Gautam P, Szedmak S, Douat J, Pahikkala T, Aittokallio T, Rousu J.  Leveraging multi-way interactions for systematic prediction of pre-clinical drug combination effects.  Nature Communications 2020. doi: 10.1038 / s41467-020-19950-z.
  3. Akimov Y, Bulanova D, Timonen S, Wennerberg K, Aittokallio T. Improved detection of differentially represented DNA barcodes for high-throughput clonal phenomics. Molecular Systems Biology 2020; 16: e9195. doi.org/10.15252/msb.20199195
  4. Ianevski A, Giri AK, Gautam P, Kononov A, Potdar S, Saarela J, Wennerberg K, Aittokallio T. Prediction of drug combination effects with a minimal set of experiments. Nature Machine Intelligence 2019; 1: 568–577. doi.org/10.1038/s42256-019-0122-4 PDF copy
  5. He L, Tang J, Andersson EI, Timonen S, Koschmieder S, Wennerberg K, Mustjoki S, Aittokallio T. Patient-customized drug combination prediction and testing for T-cell prolymphocytic leukemia patients. Cancer Research 2018; 78 (9): 2407-2418. doi: 10.1158 / 0008-5472.CAN-17-3644.