Publications 2025

Rakaee M, Tafavvoghi M, Ricciuti B, Alessi JV, Cortellini A, Citarella F, Nibid L, Perrone G, Adib E, Fulgenzi CAM, Hidalgo Filho CM, Di Federico A, Jabar F, Hashemi S, Houda I, Richardsen E, Rasmussen Busund LT, Donnem T, Bahce I, Pinato DJ, Helland Å, Sholl LM, Awad MM, Kwiatkowski DJ (2025)
Deep Learning Model for Predicting Immunotherapy Response in Advanced Non-Small Cell Lung Cancer
JAMA Oncol, 11 (2), 109-118
DOI 10.1001/jamaoncol.2024.5356, PubMed 39724105

Shvetsov N, Sildnes A, Tafavvoghi M, Busund LR, Dalen SM, Møllersen K, Bongo LA, Kilvær TK (2025)
Fast TILs-A pipeline for efficient TILs estimation in non-small cell Lung cancer
J Pathol Inform, 17, 100437
DOI 10.1016/j.jpi.2025.100437, PubMed 40230809

Publications 2024

Askar M, Tafavvoghi M, Småbrekke L, Bongo LA, Svendsen K (2024)
Using machine learning methods to predict all-cause somatic hospitalizations in adults: A systematic review
PLoS One, 19 (8), e0309175
DOI 10.1371/journal.pone.0309175, PubMed 39178283

Tafavvoghi M, Bongo LA, Shvetsov N, Busund LR, Møllersen K (2024)
Publicly available datasets of breast histopathology H&E whole-slide images: A scoping review
J Pathol Inform, 15, 100363
DOI 10.1016/j.jpi.2024.100363, PubMed 38405160

Tafavvoghi M, Sildnes A, Rakaee M, Shvetsov N, Bongo LA, Busund LR, Møllersen K (2024)
Deep learning-based classification of breast cancer molecular subtypes from H&E whole-slide images
J Pathol Inform, 16, 100410
DOI 10.1016/j.jpi.2024.100410, PubMed 39720418

Publications 2023

Rakaee M, Andersen S, Giannikou K, Paulsen EE, Kilvaer TK, Busund LR, Berg T, Richardsen E, Lombardi AP, Adib E, Pedersen MI, Tafavvoghi M, Wahl SGF, Petersen RH, Bondgaard AL, Yde CW, Baudet C, Licht P, Lund-Iversen M, Grønberg BH, Fjellbirkeland L, Helland Å, Pøhl M, Kwiatkowski DJ, Donnem T (2023)
Machine learning-based immune phenotypes correlate with STK11/KEAP1 co-mutations and prognosis in resectable NSCLC: a sub-study of the TNM-I trial
Ann Oncol, 34 (7), 578-588
DOI 10.1016/j.annonc.2023.04.005, PubMed 37100205