Protocols

• The main protocols we use in our lab have been published: Skogvold et al. (2021) and Skogvold et al. (2024)

Basics (youtube)

• Introduction to Mass Spectrometry (Link)
• Introduction to Liquid Chromatography Mass Spectrometry (Link)
• Fundamentals of MS by Waters Corporation (Link)
• Mass Spectrometry Interpretation "MS plot", "M+, M+1 & M+2 Peaks" and "MS Fragmentation"
• Quadrupole Ion Trap Mass Spectrometry (Link)

Instruments (youtube)

• Q Exactive & Ultimate 3000 by Environmental Protectin lab (Link)
• HPLC by Seeding Labs (Link1, Link2)
• Mass Spectrometry Tutorial: How to Tune Your Analytes (Link)

Statistics (youtube)

• Introduction to Statistics for Metabolomics by Dr. David Wishart at Alberta University, Canada (Link)
• Principal Component Analysis (Link1, Link2)

Software (videos)

– FreeStyle

• Getting Started (Link)

– Compound Discoverer

• CD Software Specialized Metabolite ID Online Training (Link1) (Link2) (Link3)
• What is Compound Discoverer? (Link)
• Getting Started (Link)
• Workflow Basics (Link)
• Troubleshooting (Link)

– Lipidomics Workshop: Data Analysis Tools, University of Wisconsin-Madison, USA (Link)

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