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Resources and popular analyses

Relevant articles:

RNAseq

Application of single-cell and bulk RNA sequencing in onco-immunology.

Variant calling

Systematic assessment of tumor purity and its clinical implications.

Comprehensive assessment of somatic copy number variation calling using next-generation data. 

 

 

 

 
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Recent publications

Shwe A, Krasnov A, Visnovska T, Ramberg S, Østbye TK, Andreassen R (2022)
Expression Analysis in Atlantic Salmon Liver Reveals miRNAs Associated with Smoltification and Seawater Adaptation
Biology (Basel), 11 (5)
DOI 10.3390/biology11050688, PubMed 35625416

Chakraborty S, Woldemariam NT, Visnovska T, Rise ML, Boyce D, Santander J, Andreassen R (2022)
Characterization of miRNAs in Embryonic, Larval, and Adult Lumpfish Provides a Reference miRNAome for Cyclopterus lumpus
Biology (Basel), 11 (1)
DOI 10.3390/biology11010130, PubMed 35053128

Mygland L, Brinch SA, Strand MF, Olsen PA, Aizenshtadt A, Lund K, Solberg NT, Lycke M, Thorvaldsen TE, Espada S, Misaghian D, Page CM, Agafonov O, Nygård S, Chi NW, Lin E, Tan J, Yu Y, Costa M, Krauss S, Waaler J (2021)
Identification of response signatures for tankyrase inhibitor treatment in tumor cell lines
iScience, 24 (7), 102807
DOI 10.1016/j.isci.2021.102807, PubMed 34337362

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