Institute for Medical Informatics

Publications published since 2006 or in press from OUS - Institute for Medical Informatics

263 publications found

Publications in press

1. Andersen EK, Hole KH, Lund KV, Sundfør K, Kristensen GB, Lyng H, Malinen E
   Pharmacokinetic parameters derived from dynamic contrast enhanced MRI of cervical cancers predict chemoradiotherapy outcome
   Radiother Oncol (in press)
   PubMed 23333024
2. Clancy T, Rodland EA, Nygard S, Hovig E
   Predicting physical interactions between protein complexes
   Mol Cell Proteomics (in press)
   PubMed 23438732
3. Panagopoulos I, Thorsen J, Gorunova L, Micci F, Haugom L, Davidson B, Heim S
   RNA sequencing identifies fusion of the EWSR1 and YY1 genes in mesothelioma with t(14;22)(q32;q12)
   Genes Chromosomes Cancer (in press)
   PubMed 23630070
4. Paulsen J, Lien TG, Sandve GK, Holden L, Borgan O, Glad IK, Hovig E
   Handling realistic assumptions in hypothesis testing of 3D co-localization of genomic elements
   Nucleic Acids Res (in press)
   PubMed 23571755
5. Paulsson K, Forestier E, Andersen MK, Autio K, Barbany G, Borgström G, Cavelier L, Golovleva I, Heim S, Heinonen K, Hovland R, Johannsson JH, Kjeldsen E, Nordgren A, Palmqvist L, Johansson B
   High modal number and triple trisomies are highly correlated favorable factors in childhood B-cell precursor high hyperdiploid acute lymphoblastic leukemia treated according to the NOPHO ALL 1992/2000 protocols
   Haematologica (in press)
   PubMed 23645689
6. Pust S, Klokk TI, Musa N, Jenstad M, Risberg B, Erikstein B, Tcatchoff L, Liestøl K, Danielsen HE, van Deurs B, Sandvig K
   Flotillins as regulators of ErbB2 levels in breast cancer
   Oncogene (in press)
   PubMed 22869152
7. Sandve GK, Gundersen S, Johansen M, Glad IK, Gunathasan K, Holden L, Holden M, Liestøl K, Nygård S, Nygaard V, Paulsen J, Rydbeck H, Trengereid K, Clancy T, Drabløs F, Ferkingstad E, Kalas M, Lien T, Rye MB, Frigessi A, Hovig E
   The Genomic HyperBrowser: an analysis web server for genome-scale data
   Nucleic Acids Res (in press)
   PubMed 23632163

Publications 2013

1. Andreassen OA, Thompson WK, Schork AJ, Ripke S, Mattingsdal M, Kelsoe JR, Kendler KS, O'Donovan MC, Rujescu D, Werge T, Sklar P, Psychiatric Genomics Consortium (PGC), Bipolar Disorder and Schizophrenia Working Groups, Roddey JC, Chen CH, McEvoy L, Desikan RS, Djurovic S, Dale AM (2013)
   Improved detection of common variants associated with schizophrenia and bipolar disorder using pleiotropy-informed conditional false discovery rate
   PLoS Genet, 9 (4), e1003455
   PubMed 23637625
2. Baumbusch LO, Helland Å, Wang Y, Liestøl K, Schaner ME, Holm R, Etemadmoghadam D, Alsop K, Brown P, Australian Ovarian Cancer Study Group, Mitchell G, Fereday S, DeFazio A, Bowtell DD, Kristensen GB, Lingjærde OC, Børresen-Dale AL (2013)
   High levels of genomic aberrations in serous ovarian cancers are associated with better survival
   PLoS One, 8 (1), e54356
   PubMed 23372714
3. Bøe SL, Hovig E (2013)
   Light-induced mRNA transfection
   Methods Mol Biol, 969, 89-100
   PubMed 23296929
4. Bøe SL, Jørgensen JA, Longva AS, Lavelle T, Sæbøe-Larssen S, Hovig E (2013)
   Light-controlled modulation of gene expression using polyamidoamine formulations
   Nucleic Acid Ther, 23 (2), 160-5
   PubMed 23530684
5. Domingo E, Ramamoorthy R, Oukrif D, Rosmarin D, Presz M, Wang H, Pulker H, Lockstone H, Hveem T, Cranston T, Danielsen H, Novelli M, Davidson B, Xu ZZ, Molloy P, Johnstone E, Holmes C, Midgley R, Kerr D, Sieber O, Tomlinson I (2013)
   Use of multivariate analysis to suggest a new molecular classification of colorectal cancer
   J Pathol, 229 (3), 441-8
   PubMed 23165447
6. Jørgensen JA, Longva AS, Hovig E, Bøe SL (2013)
   Evaluation of biodegradable peptide carriers for light-directed targeting
   Nucleic Acid Ther, 23 (2), 131-9
   PubMed 23405950
7. Lando M, Wilting SM, Snipstad K, Clancy T, Bierkens M, Aarnes EK, Holden M, Stokke T, Sundfør K, Holm R, Kristensen GB, Steenbergen RD, Lyng H (2013)
   Identification of eight candidate target genes of the recurrent 3p12-p14 loss in cervical cancer by integrative genomic profiling
   J Pathol, 230 (1), 59-69
   PubMed 23335387
8. Larsson C, Kleppestø M, Rasmussen I, Salo R, Vardal J, Brandal P, Bjørnerud A (2013)
   Sampling requirements in DCE-MRI based analysis of high grade gliomas: simulations and clinical results
   J Magn Reson Imaging, 37 (4), 818-29
   PubMed 23086710
9. Lee CK, Simes RJ, Brown C, Gebski V, Pfisterer J, Swart AM, Berton-Rigaud D, Plante M, Skeie-Jensen T, Vergote I, Schauer C, Pisano C, Parma G, Baumann K, Ledermann JA, Pujade-Lauraine E, Bentley J, Kristensen G, Belau A, Nankivell M, Canzler U, Lord SJ, Kurzeder C, Friedlander M (2013)
   A prognostic nomogram to predict overall survival in patients with platinum-sensitive recurrent ovarian cancer
   Ann Oncol, 24 (4), 937-43
   PubMed 23104722
10. Mattingsdal M, Brown AA, Djurovic S, Sønderby IE, Server A, Melle I, Agartz I, Hovig E, Jensen J, Andreassen OA (2013)
    Pathway analysis of genetic markers associated with a functional MRI faces paradigm implicates polymorphisms in calcium responsive pathways
    Neuroimage, 70, 143-9
    PubMed 23274185
11. Micci F, Panagopoulos I, Haugom L, Dahlback HS, Pretorius ME, Davidson B, Abeler VM, Tropé CG, Danielsen HE, Heim S (2013)
    Genomic aberration patterns and expression profiles of squamous cell carcinomas of the vulva
    Genes Chromosomes Cancer, 52 (6), 551-63
    PubMed 23404381
12. Micci F, Thorsen J, Panagopoulos I, Nyquist KB, Zeller B, Tierens A, Heim S (2013)
    High-throughput sequencing identifies an NFIA/CBFA2T3 fusion gene in acute erythroid leukemia with t(1;16)(p31;q24)
    Leukemia, 27 (4), 980-2
    PubMed 23032695
13. Onkes W, Fredrik R, Micci F, Schönbeck BJ, Martin-Subero JI, Ullmann R, Hilpert F, Bräutigam K, Janssen O, Maass N, Siebert R, Heim S, Arnold N, Weimer J (2013)
    Breakpoint characterization of the der(19)t(11;19)(q13;p13) in the ovarian cancer cell line SKOV-3
    Genes Chromosomes Cancer, 52 (5), 512-22
    PubMed 23362175
14. Panagopoulos I, Micci F, Thorsen J, Haugom L, Buechner J, Kerndrup G, Tierens A, Zeller B, Heim S (2013)
    Fusion of ZMYND8 and RELA Genes in Acute Erythroid Leukemia
    PLoS One, 8 (5), e63663
    PubMed 23667654
15. Panagopoulos I, Thorsen J, Gorunova L, Haugom L, Bjerkehagen B, Davidson B, Heim S, Micci F (2013)
    Fusion of the ZC3H7B and BCOR genes in endometrial stromal sarcomas carrying an X;22-translocation
    Genes Chromosomes Cancer, 52 (7), 610-8
    PubMed 23580382
16. Stark D, Nankivell M, Pujade-Lauraine E, Kristensen G, Elit L, Stockler M, Hilpert F, Cervantes A, Brown J, Lanceley A, Velikova G, Sabate E, Pfisterer J, Carey MS, Beale P, Qian W, Swart AM, Oza A, Perren T (2013)
    Standard chemotherapy with or without bevacizumab in advanced ovarian cancer: quality-of-life outcomes from the International Collaboration on Ovarian Neoplasms (ICON7) phase 3 randomised trial
    Lancet Oncol, 14 (3), 236-43
    PubMed 23333117
17. Venold FF, Penn MH, Thorsen J, Gu J, Kortner TM, Krogdahl A, Bakke AM (2013)
    Intestinal fatty acid binding protein (fabp2) in Atlantic salmon (Salmo salar): Localization and alteration of expression during development of diet induced enteritis
    Comp Biochem Physiol A Mol Integr Physiol, 164 (1), 229-40
    PubMed 23000355
18. Vistnes M, Høiseth AD, Røsjø H, Nygård S, Pettersen E, Søyseth V, Hurlen P, Christensen G, Omland T (2013)
    Lack of pro-inflammatory cytokine mobilization predicts poor prognosis in patients with acute heart failure
    Cytokine, 61 (3), 962-9
    PubMed 23415671

Publications 2012

1. Andersen EK, Hole KH, Lund KV, Sundfør K, Kristensen GB, Lyng H, Malinen E (2012)
   Dynamic contrast-enhanced MRI of cervical cancers: temporal percentile screening of contrast enhancement identifies parameters for prediction of chemoradioresistance
   Int J Radiat Oncol Biol Phys, 82 (3), e485-92
   PubMed 22014954
2. Athanasiu L, Brown AA, Birkenaes AB, Mattingsdal M, Agartz I, Melle I, Steen VM, Andreassen OA, Djurovic S (2012)
   Genome-wide association study identifies genetic loci associated with body mass index and high density lipoprotein-cholesterol levels during psychopharmacological treatment - a cross-sectional naturalistic study
   Psychiatry Res, 197 (3), 327-36
   PubMed 22417934
3. Barbany G, Andersen MK, Autio K, Borgström G, Franco LC, Golovleva I, Heim S, Heinonen K, Hovland R, Johansson B, Johannsson JH, Kjeldsen E, Nordgren A, Palmqvist L, Forestier E, Nordic Society of Paediatric Haematology and Oncology, Swedish Cytogenetic Leukaemia Study Group, NOPHO Leukaemia Cytogenetic Study Group (2012)
   Additional aberrations of the ETV6 and RUNX1 genes have no prognostic impact in 229 t(12;21)(p13;q22)-positive B-cell precursor acute lymphoblastic leukaemias treated according to the NOPHO-ALL-2000 protocol
   Leuk Res, 36 (7), 936-8
   PubMed 22521551
4. Bock AJ, Dong HP, Tropé CG, Staff AC, Risberg B, Davidson B (2012)
   Nucleoside transporters are widely expressed in ovarian carcinoma effusions
   Cancer Chemother Pharmacol, 69 (2), 467-75
   PubMed 21822668
5. Brown AA, Jensen J, Nikolova YS, Djurovic S, Agartz I, Server A, Ferrell RE, Manuck SB, Mattingsdal M, Melle I, Hariri AR, Frigessi A, Andreassen OA (2012)
   Genetic variants affecting the neural processing of human facial expressions: evidence using a genome-wide functional imaging approach
   Transl Psychiatry, 2, e143
   PubMed 22828495
6. Bruhn S, Barrenäs F, Mobini R, Andersson BA, Chavali S, Egan BS, Hovig E, Sandve GK, Langston MA, Rogers G, Wang H, Benson M (2012)
   Increased expression of IRF4 and ETS1 in CD4+ cells from patients with intermittent allergic rhinitis
   Allergy, 67 (1), 33-40
   PubMed 21919915
7. Christoforou A, Dondrup M, Mattingsdal M, Mattheisen M, Giddaluru S, Nöthen MM, Rietschel M, Cichon S, Djurovic S, Andreassen OA, Jonassen I, Steen VM, Puntervoll P, Le Hellard S (2012)
   Linkage-disequilibrium-based binning affects the interpretation of GWASs
   Am J Hum Genet, 90 (4), 727-33
   PubMed 22444669
8. Dieset I, Djurovic S, Tesli M, Hope S, Mattingsdal M, Michelsen A, Joa I, Larsen TK, Agartz I, Melle I, Røssberg JI, Aukrust P, Andreassen OA, Ueland T (2012)
   Up-regulation of NOTCH4 gene expression in bipolar disorder
   Am J Psychiatry, 169 (12), 1292-300
   PubMed 23212060
9. Ersland KM, Christoforou A, Stansberg C, Espeseth T, Mattheisen M, Mattingsdal M, Hardarson GA, Hansen T, Fernandes CP, Giddaluru S, Breuer R, Strohmaier J, Djurovic S, Nöthen MM, Rietschel M, Lundervold AJ, Werge T, Cichon S, Andreassen OA, Reinvang I, Steen VM, Le Hellard S (2012)
   Gene-based analysis of regionally enriched cortical genes in GWAS data sets of cognitive traits and psychiatric disorders
   PLoS One, 7 (2), e31687
   PubMed 22384057
10. Gervin K, Vigeland MD, Mattingsdal M, Hammerø M, Nygård H, Olsen AO, Brandt I, Harris JR, Undlien DE, Lyle R (2012)
    DNA methylation and gene expression changes in monozygotic twins discordant for psoriasis: identification of epigenetically dysregulated genes
    PLoS Genet, 8 (1), e1002454
    PubMed 22291603
11. Giampetruzzi A, Roumi V, Roberto R, Malossini U, Yoshikawa N, La Notte P, Terlizzi F, Credi R, Saldarelli P (2012)
    A new grapevine virus discovered by deep sequencing of virus- and viroid-derived small RNAs in Cv Pinot gris
    Virus Res, 163 (1), 262-8
    PubMed 22036729
12. Gorunova L (2012)
    Psychological determinants of information searching activity
    Work, 41 Suppl 1, 2882-6
    PubMed 22317156
13. Guastadisegni MC, Roberto R, L'Abbate A, Palumbo O, Carella M, Giordani L, Cecinati V, Giordano P, Storlazzi CT (2012)
    Thrombocytopenia-absent-radius syndrome in a child showing a larger 1q21.1 deletion than the one in his healthy mother, and a significant downregulation of the commonly deleted genes
    Eur J Med Genet, 55 (2), 120-3
    PubMed 22201559
14. Halle C, Andersen E, Lando M, Aarnes EK, Hasvold G, Holden M, Syljuåsen RG, Sundfør K, Kristensen GB, Holm R, Malinen E, Lyng H (2012)
    Hypoxia-induced gene expression in chemoradioresistant cervical cancer revealed by dynamic contrast-enhanced MRI
    Cancer Res, 72 (20), 5285-95
    PubMed 22890239
15. Horgmo ØH, Danielsen HE (2012)
    A camera support for operating theatre videography
    J Vis Commun Med, 35 (1), 20-4
    PubMed 22397480
16. Håvik AB, Brandal P, Honne H, Dahlback HS, Scheie D, Hektoen M, Meling TR, Helseth E, Heim S, Lothe RA, Lind GE (2012)
    MGMT promoter methylation in gliomas-assessment by pyrosequencing and quantitative methylation-specific PCR
    J Transl Med, 10, 36
    PubMed 22390413
17. Jørgensen JA, Hovig E, Bøe SL (2012)
    Potent gene silencing in vitro at physiological pH using chitosan polymers
    Nucleic Acid Ther, 22 (2), 96-102
    PubMed 22480314
18. Kaye S, Aamdal S, Jones R, Freyer G, Pujade-Lauraine E, de Vries EG, Barriuso J, Sandhu S, Tan DS, Hartog V, Kuenen B, Ruijter R, Kristensen GB, Nyakas M, Barrett S, Burke W, Pietersma D, Stuart M, Emeribe U, Boven E (2012)
    Phase I study of saracatinib (AZD0530) in combination with paclitaxel and/or carboplatin in patients with solid tumours
    Br J Cancer, 106 (11), 1728-34
    PubMed 22531637
19. Kildal W, Micci F, Risberg B, Abeler VM, Kristensen GB, Heim S, Danielsen HE (2012)
    Genomic imbalances in endometrial adenocarcinomas - comparison of DNA ploidy, karyotyping and comparative genomic hybridization
    Mol Oncol, 6 (1), 98-107
    PubMed 22062770
20. Kresse SH, Rydbeck H, Skårn M, Namløs HM, Barragan-Polania AH, Cleton-Jansen AM, Serra M, Liestøl K, Hogendoorn PC, Hovig E, Myklebost O, Meza-Zepeda LA (2012)
    Integrative analysis reveals relationships of genetic and epigenetic alterations in osteosarcoma
    PLoS One, 7 (11), e48262
    PubMed 23144859
21. Larsen HA, Austbø L, Mørkøre T, Thorsen J, Hordvik I, Fischer U, Jirillo E, Rimstad E, Koppang EO (2012)
    Pigment-producing granulomatous myopathy in Atlantic salmon: a novel inflammatory response
    Fish Shellfish Immunol, 33 (2), 277-85
    PubMed 22634154
22. Lindemann K, Christensen RD, Vergote I, Stuart G, Izquierdo MA, Kærn J, Havsteen H, Eisenhauer E, Ridderheim M, Lopez AB, Hirte H, Aavall-Lundquvist E, Vrdoljak E, Green J, Kristensen GB (2012)
    First-line treatment of advanced ovarian cancer with paclitaxel/carboplatin with or without epirubicin (TEC versus TC)--a gynecologic cancer intergroup study of the NSGO, EORTC GCG and NCIC CTG
    Ann Oncol, 23 (10), 2613-9
    PubMed 22539562
23. Lindholm EM, Kristian A, Nalwoga H, Krüger K, Nygård S, Akslen LA, Mælandsmo GM, Engebraaten O (2012)
    Effect of antiangiogenic therapy on tumor growth, vasculature and kinase activity in basal- and luminal-like breast cancer xenografts
    Mol Oncol, 6 (4), 418-27
    PubMed 22521242
24. Liu F, Kuo WP, Jenssen TK, Hovig E (2012)
    Performance comparison of multiple microarray platforms for gene expression profiling
    Methods Mol Biol, 802, 141-55
    PubMed 22130879
25. Nakken S, Johansen M, Fillebeen J, Berge OP, Kirkerød H, Jenssen TK, Hovig E (2012)
    CellLineMiner: a knowledge portal for human cell lines
    Bioinformation, 8 (22), 1119-22
    PubMed 23251048
26. Nielsen B, Albregtsen F, Danielsen HE (2012)
    Automatic segmentation of cell nuclei in Feulgen-stained histological sections of prostate cancer and quantitative evaluation of segmentation results
    Cytometry A, 81 (7), 588-601
    PubMed 22605528
27. Nielsen B, Albregtsen F, Kildal W, Abeler VM, Kristensen GB, Danielsen HE (2012)
    The prognostic value of adaptive nuclear texture features from patient gray level entropy matrices in early stage ovarian cancer
    Anal Cell Pathol (Amst), 35 (4), 305-14
    PubMed 22596183
28. Nordstrand LM, Furu K, Paulsen J, Rognes T, Klungland A (2012)
    Alkbh1 and Tzfp repress a non-repeat piRNA cluster in pachytene spermatocytes
    Nucleic Acids Res, 40 (21), 10950-63
    PubMed 22965116
29. Nyquist KB, Panagopoulos I, Thorsen J, Haugom L, Gorunova L, Bjerkehagen B, Fosså A, Guriby M, Nome T, Lothe RA, Skotheim RI, Heim S, Micci F (2012)
    Whole-transcriptome sequencing identifies novel IRF2BP2-CDX1 fusion gene brought about by translocation t(1;5)(q42;q32) in mesenchymal chondrosarcoma
    PLoS One, 7 (11), e49705
    PubMed 23185413
30. Nyquist KB, Panagopoulos I, Thorsen J, Roberto R, Wik HS, Tierens A, Heim S, Micci F (2012)
    t(12;13)(q14;q31) leading to HMGA2 upregulation in acute myeloid leukaemia
    Br J Haematol, 157 (6), 769-71
    PubMed 22404713
31. Panagopoulos I, Micci F, Thorsen J, Gorunova L, Eibak AM, Bjerkehagen B, Davidson B, Heim S (2012)
    Novel fusion of MYST/Esa1-associated factor 6 and PHF1 in endometrial stromal sarcoma
    PLoS One, 7 (6), e39354
    PubMed 22761769
32. Panagopoulos I, Micci F, Thorsen J, Haugom L, Tierens A, Ulvmoen A, Heim S (2012)
    A novel TCF3-HLF fusion transcript in acute lymphoblastic leukemia with a t(17;19)(q22;p13)
    Cancer Genet, 205 (12), 669-72
    PubMed 23181981
33. Pradhan M, Abeler VM, Danielsen HE, Sandstad B, Tropé CG, Kristensen GB, Risberg BÅ (2012)
    Prognostic importance of DNA ploidy and DNA index in stage I and II endometrioid adenocarcinoma of the endometrium
    Ann Oncol, 23 (5), 1178-84
    PubMed 21965471
34. Pradhan M, Davidson B, Abeler VM, Danielsen HE, Tropé CG, Kristensen GB, Risberg BÅ (2012)
    DNA ploidy may be a prognostic marker in stage I and II serous adenocarcinoma of the endometrium
    Virchows Arch, 461 (3), 291-8
    PubMed 22824999
35. Røsjø H, Nygård S, Kaukonen KM, Karlsson S, Stridsberg M, Ruokonen E, Pettilä V, Omland T, FINNSEPSIS Study Group (2012)
    Prognostic value of chromogranin A in severe sepsis: data from the FINNSEPSIS study
    Intensive Care Med, 38 (5), 820-9
    PubMed 22491939
36. Røsjø H, Tamm NN, Kravdal G, Seferian KR, Høiseth AD, Nygård S, Badr P, Røysland R, Omland T (2012)
    Diagnostic utility of a single-epitope sandwich B-type natriuretic peptide assay in stable coronary artery disease: data from the Akershus Cardiac Examination (ACE) 1 Study
    Clin Biochem, 45 (16-17), 1269-75
    PubMed 22609895
37. Røysland R, Kravdal G, Høiseth AD, Nygård S, Badr P, Hagve TA, Omland T, Røsjø H (2012)
    Cardiac troponin T levels and exercise stress testing in patients with suspected coronary artery disease: the Akershus Cardiac Examination (ACE) 1 study
    Clin Sci (Lond), 122 (12), 599-606
    PubMed 22239123
38. Skotheim RI, Meza-Zepeda LA, Hovig E, Lønning PE, Lothe RA, Myklebost O (2012)
    [Genome sequencing for personalized cancer treatment]
    Tidsskr Nor Laegeforen, 132 (21), 2406-8
    PubMed 23160594
39. Stein JL, Medland SE, Vasquez AA, Hibar DP, Senstad RE, Winkler AM, Toro R, Appel K, Bartecek R, Bergmann Ø, Bernard M, Brown AA, Cannon DM, Chakravarty MM, Christoforou A, Domin M, Grimm O, Hollinshead M, Holmes AJ, Homuth G, Hottenga JJ, Langan C, Lopez LM, Hansell NK, Hwang KS et al. (2012)
    Identification of common variants associated with human hippocampal and intracranial volumes
    Nat Genet, 44 (5), 552-61
    PubMed 22504417
40. Thingnes J, Lavelle TJ, Gjuvsland AB, Omholt SW, Hovig E (2012)
    Towards a quantitative understanding of the MITF-PIAS3-STAT3 connection
    BMC Syst Biol, 6, 11
    PubMed 22316093
41. Thingnes J, Lavelle TJ, Hovig E, Omholt SW (2012)
    Understanding the melanocyte distribution in human epidermis: an agent-based computational model approach
    PLoS One, 7 (7), e40377
    PubMed 22792296
42. Thorsen J, Aamot HV, Roberto R, Tjønnfjord GE, Micci F, Heim S (2012)
    Myelodysplastic syndrome with a t(2;11)(p21;q23-24) and translocation breakpoint close to miR-125b-1
    Cancer Genet, 205 (10), 528-32
    PubMed 22944560
43. Tjønnfjord GE, Ly BE, Johannesen TB, Tierens A, Beiske K, Heim S, Jønsson V (2012)
    Chronic lymphocytic leukaemia in Norway--incidence and prognostic markers at diagnosis
    Tidsskr Nor Laegeforen, 132 (18), 2056-9
    PubMed 23038195
44. Trachtenberg AJ, Robert JH, Abdalla AE, Fraser A, He SY, Lacy JN, Rivas-Morello C, Truong A, Hardiman G, Ohno-Machado L, Liu F, Hovig E, Kuo WP (2012)
    A primer on the current state of microarray technologies
    Methods Mol Biol, 802, 3-17
    PubMed 22130870
45. Tropé CG, Abeler VM, Kristensen GB (2012)
    Diagnosis and treatment of sarcoma of the uterus. A review
    Acta Oncol, 51 (6), 694-705
    PubMed 22793037
46. Waehre A, Vistnes M, Sjaastad I, Nygård S, Husberg C, Lunde IG, Aukrust P, Yndestad A, Vinge LE, Behmen D, Neukamm C, Brun H, Thaulow E, Christensen G (2012)
    Chemokines regulate small leucine-rich proteoglycans in the extracellular matrix of the pressure-overloaded right ventricle
    J Appl Physiol, 112 (8), 1372-82
    PubMed 22345433
47. Wirgenes KV, Sønderby IE, Haukvik UK, Mattingsdal M, Tesli M, Athanasiu L, Sundet K, Røssberg JI, Dale AM, Brown AA, Agartz I, Melle I, Djurovic S, Andreassen OA (2012)
    TCF4 sequence variants and mRNA levels are associated with neurodevelopmental characteristics in psychotic disorders
    Transl Psychiatry, 2, e112
    PubMed 22832956

Publications 2011

1. Andersen EK, Kristensen GB, Lyng H, Malinen E (2011)
   Pharmacokinetic analysis and k-means clustering of DCEMR images for radiotherapy outcome prediction of advanced cervical cancers
   Acta Oncol, 50 (6), 859-65
   PubMed 21767185
2. Andersen MK, Autio K, Barbany G, Borgström G, Cavelier L, Golovleva I, Heim S, Heinonen K, Hovland R, Johannsson JH, Johansson B, Kjeldsen E, Nordgren A, Palmqvist L, Forestier E (2011)
   Paediatric B-cell precursor acute lymphoblastic leukaemia with t(1;19)(q23;p13): clinical and cytogenetic characteristics of 47 cases from the Nordic countries treated according to NOPHO protocols
   Br J Haematol, 155 (2), 235-43
   PubMed 21902680
3. Bøe S, Prasmickaite L, Engesæter B, Hovig E (2011)
   Light-directed delivery of nucleic acids
   Methods Mol Biol, 764, 107-21
   PubMed 21748636
4. Clancy T, Pedicini M, Castiglione F, Santoni D, Nygaard V, Lavelle TJ, Benson M, Hovig E (2011)
   Immunological network signatures of cancer progression and survival
   BMC Med Genomics, 4, 28
   PubMed 21453479
5. Dahlback HS, Brandal P, Gorunova L, Widing E, Meling TR, Krossnes BK, Heim S (2011)
   Genomic aberrations in pediatric gliomas and embryonal tumors
   Genes Chromosomes Cancer, 50 (10), 788-99
   PubMed 21717527
6. Dahlback HS, Brandal P, Krossnes BK, Fric R, Meling TR, Meza-Zepeda LA, Danielsen HE, Heim S (2011)
   Multiple chromosomal monosomies are characteristic of giant cell ependymoma
   Hum Pathol, 42 (12), 2042-6
   PubMed 21683982
7. Dahlback HS, Gorunova L, Brandal P, Scheie D, Helseth E, Meling TR, Heim S (2011)
   Genomic aberrations in diffuse low-grade gliomas
   Genes Chromosomes Cancer, 50 (6), 409-20
   PubMed 21412929
8. Dahlback HS, Gorunova L, Micci F, Scheie D, Brandal P, Meling TR, Heim S (2011)
   Molecular cytogenetic analysis of a gliosarcoma with osseous metaplasia
   Cytogenet Genome Res, 134 (2), 88-95
   PubMed 21555877
9. De Beule J, Hovig E, Benson M (2011)
   Introducing Dynamics into the Field of Biosemiotics A Formal Account with Examples from Language and Immunology
   Biosemiotics, 4 (1), 5-24
10. Dong HP, Holth A, Ruud MG, Emilsen E, Risberg B, Davidson B (2011)
    Measurement of apoptosis in cytological specimens by flow cytometry: comparison of Annexin V, caspase cleavage and dUTP incorporation assays
    Cytopathology, 22 (6), 365-72
    PubMed 21054589
11. Dong HP, Ree Rosnes AK, Bock AJ, Holth A, Flørenes VA, Trope' CG, Risberg B, Davidson B (2011)
    Flow cytometric measurement of cellular FLICE-inhibitory protein (c-FLIP) in ovarian carcinoma effusions
    Cytopathology, 22 (6), 373-82
    PubMed 22032542
12. Dunn JM, Hveem T, Pretorius M, Oukrif D, Nielsen B, Albregtsen F, Lovat LB, Novelli MR, Danielsen HE (2011)
    Comparison of nuclear texture analysis and image cytometric DNA analysis for the assessment of dysplasia in Barrett's oesophagus
    Br J Cancer, 105 (8), 1218-23
    PubMed 21934680
13. Gorunova L, Bjerkehagen B, Heim S (2011)
    Paratesticular leiomyoma with a der(14)t(12;14)(q15;q24)
    Cancer Genet, 204 (8), 465-8
    PubMed 21962898
14. Gundersen S, Kala? M, Abul O, Frigessi A, Hovig E, Sandve GK (2011)
    Identifying elemental genomic track types and representing them uniformly
    BMC Bioinformatics, 12, 494
    PubMed 22208806
15. Halle C, Lando M, Sundfør K, Kristensen GB, Holm R, Lyng H (2011)
    Phosphorylation of EGFR measured with in situ proximity ligation assay: relationship to EGFR protein level and gene dosage in cervical cancer
    Radiother Oncol, 101 (1), 152-7
    PubMed 21680035
16. Halle C, Lando M, Svendsrud DH, Clancy T, Holden M, Sundfør K, Kristensen GB, Holm R, Lyng H (2011)
    Membranous expression of ectodomain isoforms of the epidermal growth factor receptor predicts outcome after chemoradiotherapy of lymph node-negative cervical cancer
    Clin Cancer Res, 17 (16), 5501-12
    PubMed 21737508
17. Helland Å, Anglesio MS, George J, Cowin PA, Johnstone CN, House CM, Sheppard KE, Etemadmoghadam D, Melnyk N, Rustgi AK, Phillips WA, Johnsen H, Holm R, Kristensen GB, Birrer MJ, Australian Ovarian Cancer Study Group, Pearson RB, Børresen-Dale AL, Huntsman DG, deFazio A, Creighton CJ, Smyth GK, Bowtell DD (2011)
    Deregulation of MYCN, LIN28B and LET7 in a molecular subtype of aggressive high-grade serous ovarian cancers
    PLoS One, 6 (4), e18064
    PubMed 21533284
18. Hjortland GO, Meza-Zepeda LA, Beiske K, Ree AH, Tveito S, Hoifodt H, Bohler PJ, Hole KH, Myklebost O, Fodstad O, Smeland S, Hovig E (2011)
    Genome wide single cell analysis of chemotherapy resistant metastatic cells in a case of gastroesophageal adenocarcinoma
    BMC Cancer, 11, 455
    PubMed 22014070
19. Kyriazoglou AI, Dimitriadis E, Arnogiannaki N, Brandal P, Heim S, Pandis N (2011)
    Similar cytogenetic findings in two synchronous secondary peripheral chondrosarcomas in a patient with multiple osteochondromas
    Cancer Genet, 204 (12), 677-81
    PubMed 22285020
20. Micci F, Thorsen J, Haugom L, Zeller B, Tierens A, Heim S (2011)
    Translocation t(1;16)(p31;q24) rearranging CBFA2T3 is specific for acute erythroid leukemia
    Leukemia, 25 (9), 1510-2
    PubMed 21606959
21. Møller P, Clark N, Mæhle L (2011)
    A SImplified method for Segregation Analysis (SISA) to determine penetrance and expression of a genetic variant in a family
    Hum Mutat, 32 (5), 568-71
    PubMed 21309035
22. Nyquist KB, Thorsen J, Zeller B, Haaland A, Trøen G, Heim S, Micci F (2011)
    Identification of the TAF15-ZNF384 fusion gene in two new cases of acute lymphoblastic leukemia with a t(12;17)(p13;q12)
    Cancer Genet, 204 (3), 147-52
    PubMed 21504714
23. Perren TJ, Swart AM, Pfisterer J, Ledermann JA, Pujade-Lauraine E, Kristensen G, Carey MS, Beale P, Cervantes A, Kurzeder C, du Bois A, Sehouli J, Kimmig R, Stähle A, Collinson F, Essapen S, Gourley C, Lortholary A, Selle F, Mirza MR, Leminen A, Plante M, Stark D, Qian W, Parmar MK et al. (2011)
    A phase 3 trial of bevacizumab in ovarian cancer
    N Engl J Med, 365 (26), 2484-96
    PubMed 22204725
24. Rustin GJ, Vergote I, Eisenhauer E, Pujade-Lauraine E, Quinn M, Thigpen T, du Bois A, Kristensen G, Jakobsen A, Sagae S, Greven K, Parmar M, Friedlander M, Cervantes A, Vermorken J, Gynecological Cancer Intergroup (2011)
    Definitions for response and progression in ovarian cancer clinical trials incorporating RECIST 1.1 and CA 125 agreed by the Gynecological Cancer Intergroup (GCIG)
    Int J Gynecol Cancer, 21 (2), 419-23
    PubMed 21270624
25. Sandve GK, Ferkingstad E, Nygård S (2011)
    Sequential Monte Carlo multiple testing
    Bioinformatics, 27 (23), 3235-41
    PubMed 21998154
26. Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Drabløs F, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E (2011)
    The differential disease regulome
    BMC Genomics, 12, 353
    PubMed 21736759
27. Star B, Nederbragt AJ, Jentoft S, Grimholt U, Malmstrøm M, Gregers TF, Rounge TB, Paulsen J, Solbakken MH, Sharma A, Wetten OF, Lanzén A, Winer R, Knight J, Vogel JH, Aken B, Andersen O, Lagesen K, Tooming-Klunderud A, Edvardsen RB, Tina KG, Espelund M, Nepal C, Previti C, Karlsen BO et al. (2011)
    The genome sequence of Atlantic cod reveals a unique immune system
    Nature, 477 (7363), 207-10
    PubMed 21832995
28. Teixeira MR, Heim S (2011)
    Cytogenetic analysis of tumor clonality
    Adv Cancer Res, 112, 127-49
    PubMed 21925303
29. Tesli M, Koefoed P, Athanasiu L, Mattingsdal M, Gustafsson O, Agartz I, Rimol LM, Brown A, Wirgenes KV, Smorr LL, Kähler AK, Werge T, Mors O, Mellerup E, Jönsson EG, Melle I, Morken G, Djurovic S, Andreassen OA (2011)
    Association analysis of ANK3 gene variants in nordic bipolar disorder and schizophrenia case-control samples
    Am J Med Genet B Neuropsychiatr Genet, 156B (8), 969-74
    PubMed 21972176
30. Thigpen T, duBois A, McAlpine J, DiSaia P, Fujiwara K, Hoskins W, Kristensen G, Mannel R, Markman M, Pfisterer J, Quinn M, Reed N, Swart AM, Berek J, Colombo N, Freyer G, Gallardo D, Plante M, Poveda A, Rubinstein L, Bacon M, Kitchener H, Stuart GC, Gynecologic Cancer InterGroup (2011)
    First-line therapy in ovarian cancer trials
    Int J Gynecol Cancer, 21 (4), 756-62
    PubMed 21543937
31. Thorsen J, Micci F, Heim S (2011)
    Identification of chromosomal breakpoints of cancer-specific translocations by rolling circle amplification and long-distance inverse PCR
    Cancer Genet, 204 (8), 458-61
    PubMed 21962896
32. Vergote I, Amant F, Kristensen G, Ehlen T, Reed NS, Casado A (2011)
    Primary surgery or neoadjuvant chemotherapy followed by interval debulking surgery in advanced ovarian cancer
    Eur J Cancer, 47 Suppl 3, S88-92
    PubMed 21944035
33. Verleye L, Ottevanger PB, Kristensen GB, Ehlen T, Johnson N, van der Burg ME, Reed NS, Verheijen RH, Gaarenstroom KN, Mosgaard B, Seoane JM, van der Velden J, Lotocki R, van der Graaf W, Penninckx B, Coens C, Stuart G, Vergote I (2011)
    Quality of pathology reports for advanced ovarian cancer: are we missing essential information? An audit of 479 pathology reports from the EORTC-GCG 55971/NCIC-CTG OV13 neoadjuvant trial
    Eur J Cancer, 47 (1), 57-64
    PubMed 20850296
34. Vistad I, Cvancarova M, Kristensen GB, Fosså SD (2011)
    A study of chronic pelvic pain after radiotherapy in survivors of locally advanced cervical cancer
    J Cancer Surviv, 5 (2), 208-16
    PubMed 21259075
35. Waehre A, Halvorsen B, Yndestad A, Husberg C, Sjaastad I, Nygård S, Dahl CP, Ahmed MS, Finsen AV, Reims H, Louch WE, Hilfiker-Kleiner D, Vinge LE, Roald B, Attramadal H, Lipp M, Gullestad L, Aukrust P, Christensen G (2011)
    Lack of chemokine signaling through CXCR5 causes increased mortality, ventricular dilatation and deranged matrix during cardiac pressure overload
    PLoS One, 6 (4), e18668
    PubMed 21533157
36. Warsame AA, Aasheim HC, Nustad K, Trøen G, Tierens A, Wang V, Randen U, Dong HP, Heim S, Brech A, Delabie J (2011)
    Splenic marginal zone lymphoma with VH1-02 gene rearrangement expresses poly- and self-reactive antibodies with similar reactivity
    Blood, 118 (12), 3331-9
    PubMed 21725051
37. Ågesen TH, Berg M, Clancy T, Thiis-Evensen E, Cekaite L, Lind GE, Nesland JM, Bakka A, Mala T, Hauss HJ, Fetveit T, Vatn MH, Hovig E, Nesbakken A, Lothe RA, Skotheim RI (2011)
    CLC and IFNAR1 are differentially expressed and a global immunity score is distinct between early- and late-onset colorectal cancer
    Genes Immun, 12 (8), 653-62
    PubMed 21716316

Publications 2010

1. Akbari A, Albregtsen F, Jakobsen KS (2010)
   Automatic lane detection and separation in one dimensional gel images using continuous wavelet transform
   Anal. Methods, 2 (9), 1360-1371
2. Amdal CD, Jacobsen AB, Tausjø JE, Wiig JN, Warloe T, Karlsen KO, Sandstad B, Bjordal K (2010)
   Radical treatment for oesophageal cancer patients unfit for surgery and chemotherapy. A 10-year experience from the Norwegian Radium Hospital
   Acta Oncol, 49 (2), 209-18
   PubMed 19929566
3. Athanasiu L, Mattingsdal M, Kähler AK, Brown A, Gustafsson O, Agartz I, Giegling I, Muglia P, Cichon S, Rietschel M, Pietiläinen OP, Peltonen L, Bramon E, Collier D, Clair DS, Sigurdsson E, Petursson H, Rujescu D, Melle I, Steen VM, Djurovic S, Andreassen OA (2010)
   Gene variants associated with schizophrenia in a Norwegian genome-wide study are replicated in a large European cohort
   J Psychiatr Res, 44 (12), 748-53
   PubMed 20185149
4. Brandal P, Teixeira MR, Heim S (2010)
   Genotypic and phenotypic classification of cancer: How should the impact of the two diagnostic approaches best be balanced?
   Genes Chromosomes Cancer, 49 (9), 763-74
   PubMed 20607708
5. Bøe S, Saebøe-Larssen S, Hovig E (2010)
   Light-induced gene expression using messenger RNA molecules
   Oligonucleotides, 20 (1), 1-6
   PubMed 20038251
6. Bøe SL, Longva AS, Hovig E (2010)
   Cyclodextrin-containing polymer delivery system for light-directed siRNA gene silencing
   Oligonucleotides, 20 (4), 175-82
   PubMed 20645877
7. Djurovic S, Gustafsson O, Mattingsdal M, Athanasiu L, Bjella T, Tesli M, Agartz I, Lorentzen S, Melle I, Morken G, Andreassen OA (2010)
   A genome-wide association study of bipolar disorder in Norwegian individuals, followed by replication in Icelandic sample
   J Affect Disord, 126 (1-2), 312-6
   PubMed 20451256
8. du Bois A, Herrstedt J, Hardy-Bessard AC, Müller HH, Harter P, Kristensen G, Joly F, Huober J, Avall-Lundqvist E, Weber B, Kurzeder C, Jelic S, Pujade-Lauraine E, Burges A, Pfisterer J, Gropp M, Staehle A, Wimberger P, Jackisch C, Sehouli J (2010)
   Phase III trial of carboplatin plus paclitaxel with or without gemcitabine in first-line treatment of epithelial ovarian cancer
   J Clin Oncol, 28 (27), 4162-9
   PubMed 20733132
9. Eide MB, Liestøl K, Lingjaerde OC, Hystad ME, Kresse SH, Meza-Zepeda L, Myklebost O, Trøen G, Aamot HV, Holte H, Smeland EB, Delabie J (2010)
   Genomic alterations reveal potential for higher grade transformation in follicular lymphoma and confirm parallel evolution of tumor cell clones
   Blood, 116 (9), 1489-97
   PubMed 20505157
10. Hellebust TP, Kristensen GB, Olsen DR (2010)
    Late effects after radiotherapy for locally advanced cervical cancer: comparison of two brachytherapy schedules and effect of dose delivered weekly
    Int J Radiat Oncol Biol Phys, 76 (3), 713-8
    PubMed 19427739
11. Hogberg T, Signorelli M, de Oliveira CF, Fossati R, Lissoni AA, Sorbe B, Andersson H, Grenman S, Lundgren C, Rosenberg P, Boman K, Tholander B, Scambia G, Reed N, Cormio G, Tognon G, Clarke J, Sawicki T, Zola P, Kristensen G (2010)
    Sequential adjuvant chemotherapy and radiotherapy in endometrial cancer--results from two randomised studies
    Eur J Cancer, 46 (13), 2422-31
    PubMed 20619634
12. Hougen K, Aronsen JM, Stokke MK, Enger U, Nygard S, Andersson KB, Christensen G, Sejersted OM, Sjaastad I (2010)
    Cre-loxP DNA recombination is possible with only minimal unspecific transcriptional changes and without cardiomyopathy in Tg(alphaMHC-MerCreMer) mice
    Am J Physiol Heart Circ Physiol, 299 (5), H1671-8
    PubMed 20802136
13. Micci F, Haugom L, Ahlquist T, Andersen HK, Abeler VM, Davidson B, Trope CG, Lothe RA, Heim S (2010)
    Genomic aberrations in borderline ovarian tumors
    J Transl Med, 8, 21
    PubMed 20184781
14. Micci F, Skotheim RI, Haugom L, Weimer J, Eibak AM, Abeler VM, Trope CG, Arnold N, Lothe RA, Heim S (2010)
    Array-CGH analysis of microdissected chromosome 19 markers in ovarian carcinoma identifies candidate target genes
    Genes Chromosomes Cancer, 49 (11), 1046-53
    PubMed 20725991
15. Nakken S, Rødland EA, Hovig E (2010)
    Impact of DNA physical properties on local sequence bias of human mutation
    Hum Mutat, 31 (12), 1316-25
    PubMed 20886615
16. Pedersen M, Bonnier N, Hardeberg JY, Albregtsen F (2010)
    Attributes of image quality for color prints
    J. Electron. Imaging, 19 (1), 011016
17. Pedicini M, Barrenäs F, Clancy T, Castiglione F, Hovig E, Kanduri K, Santoni D, Benson M (2010)
    Combining network modeling and gene expression microarray analysis to explore the dynamics of Th1 and Th2 cell regulation
    PLoS Comput Biol, 6 (12), e1001032
    PubMed 21187905
18. Pradhan M, Abeler VM, Davidson B, Kildal W, Nybøen A, Tropé CG, Risberg B, Danielsen HE (2010)
    DNA ploidy heterogeneity in endometrial carcinoma: comparison between curettage and hysterectomy specimens
    Int J Gynecol Pathol, 29 (6), 572-8
    PubMed 20881853
19. Pradhan M, Risberg BA, Tropé CG, van de Rijn M, Gilks CB, Lee CH (2010)
    Gross genomic alterations and gene expression profiles of high- grade serous carcinoma of the ovary with and without BRCA1 inactivation
    BMC Cancer, 10, 493
    PubMed 20843305
20. Pujade-Lauraine E, Wagner U, Aavall-Lundqvist E, Gebski V, Heywood M, Vasey PA, Volgger B, Vergote I, Pignata S, Ferrero A, Sehouli J, Lortholary A, Kristensen G, Jackisch C, Joly F, Brown C, Le Fur N, du Bois A (2010)
    Pegylated liposomal Doxorubicin and Carboplatin compared with Paclitaxel and Carboplatin for patients with platinum-sensitive ovarian cancer in late relapse
    J Clin Oncol, 28 (20), 3323-9
    PubMed 20498395
21. Rimol LM, Agartz I, Djurovic S, Brown AA, Roddey JC, Kähler AK, Mattingsdal M, Athanasiu L, Joyner AH, Schork NJ, Halgren E, Sundet K, Melle I, Dale AM, Andreassen OA, Alzheimer's Disease Neuroimaging Initiative (2010)
    Sex-dependent association of common variants of microcephaly genes with brain structure
    Proc Natl Acad Sci U S A, 107 (1), 384-8
    PubMed 20080800
22. Rustin GJ, van der Burg ME, Griffin CL, Guthrie D, Lamont A, Jayson GC, Kristensen G, Mediola C, Coens C, Qian W, Parmar MK, Swart AM, MRC OV05, EORTC 55955 investigators (2010)
    Early versus delayed treatment of relapsed ovarian cancer (MRC OV05/EORTC 55955): a randomised trial
    Lancet, 376 (9747), 1155-63
    PubMed 20888993
23. Sandve GK, Gundersen S, Rydbeck H, Glad IK, Holden L, Holden M, Liestøl K, Clancy T, Ferkingstad E, Johansen M, Nygaard V, Tøstesen E, Frigessi A, Hovig E (2010)
    The Genomic HyperBrowser: inferential genomics at the sequence level
    Genome Biol, 11 (12), R121
    PubMed 21182759
24. Santos J, Cerveira N, Bizarro S, Ribeiro FR, Correia C, Torres L, Lisboa S, Vieira J, Mariz JM, Norton L, Snijder S, Mellink CH, Buijs A, Shih LY, Strehl S, Micci F, Heim S, Teixeira MR (2010)
    Expression pattern of the septin gene family in acute myeloid leukemias with and without MLL-SEPT fusion genes
    Leuk Res, 34 (5), 615-21
    PubMed 19748670
25. Tesli M, Athanasiu L, Mattingsdal M, Kähler AK, Gustafsson O, Andreassen BK, Werge T, Hansen T, Mors O, Mellerup E, Koefoed P, Jönsson EG, Agartz I, Melle I, Morken G, Djurovic S, Andreassen OA (2010)
    Association analysis of PALB2 and BRCA2 in bipolar disorder and schizophrenia in a scandinavian case-control sample
    Am J Med Genet B Neuropsychiatr Genet, 153B (7), 1276-82
    PubMed 20872766
26. Tropé CG, Kristensen GB (2010)
    The treatment of recurrent cervical cancer
    CME Journal of Gynecologic Oncology, 15 (1), 72-90
    PublikaID 106
27. Tropé CG, Kristensen GB (2010)
    Surgery in treatment of recurrent cervical cancer
    CME Journal of Gynecologic Oncology, 15 (1), 33-39
    PublikaID 104
28. Vergote I, Pujade-Lauraine E, Pignata S, Kristensen GB, Ledermann J, Casado A, Sehouli J, Mirza M, Fossati R, Marth C, Creutzberg C, Del Campo J, Siddiqui N, Calvert P, Bamias A, Tulunay G, van der Zee AG, du Bois A, European Network of Gynaecological Oncological Trial Groups (2010)
    European Network of Gynaecological Oncological Trial Groups' requirements for trials between academic groups and pharmaceutical companies
    Int J Gynecol Cancer, 20 (3), 476-8
    PubMed 20375816
29. Vergote I, Tropé CG, Amant F, Kristensen GB, Ehlen T, Johnson N, Verheijen RH, van der Burg ME, Lacave AJ, Panici PB, Kenter GG, Casado A, Mendiola C, Coens C, Verleye L, Stuart GC, Pecorelli S, Reed NS, European Organization for Research and Treatment of Cancer-Gynaecological Cancer Group, NCIC Clinical Trials Group (2010)
    Neoadjuvant chemotherapy or primary surgery in stage IIIC or IV ovarian cancer
    N Engl J Med, 363 (10), 943-53
    PubMed 20818904
30. Wang L, Jin Y, Arnoldussen YJ, Jonson I, Qu S, Maelandsmo GM, Kristian A, Risberg B, Waehre H, Danielsen HE, Saatcioglu F (2010)
    STAMP1 is both a proliferative and an antiapoptotic factor in prostate cancer
    Cancer Res, 70 (14), 5818-28
    PubMed 20587517

Publications 2009

1. Abeler VM, Røyne O, Thoresen S, Danielsen HE, Nesland JM, Kristensen GB (2009)
   Uterine sarcomas in Norway. A histopathological and prognostic survey of a total population from 1970 to 2000 including 419 patients
   Histopathology, 54 (3), 355-64
   PubMed 19236512
2. Albregtsen F (2009)
   How to calculate the goodness-of-fit of a fractal dimension
   Cell Oncol, 31 (6), 501
   PubMed 19940365
3. Bjerner J, Theodorsson E, Hovig E, Kallner A (2009)
   Non-parametric estimation of reference intervals in small non-Gaussian sample sets
   Accredit. Qual. Assur., 14 (4), 185-192
4. Bondi J, Pretorius M, Bukholm I, Danielsen H (2009)
   Large-scale genomic instability in colon adenocarcinomas and correlation with patient outcome
   APMIS, 117 (10), 730-6
   PubMed 19775341
5. Brandal P, Bjerkehagen B, Bruland OS, Skjeldal S, Bogsrud TV, Hall KS (2009)
   Synchronous and metachronous skeletal osteosarcomas: the Norwegian Radium Hospital experience
   Acta Oncol, 48 (8), 1165-72
   PubMed 19863225
6. Brandal P, Panagopoulos I, Bjerkehagen B, Heim S (2009)
   t(19;22)(q13;q12) Translocation leading to the novel fusion gene EWSR1-ZNF444 in soft tissue myoepithelial carcinoma
   Genes Chromosomes Cancer, 48 (12), 1051-6
   PubMed 19760602
7. Brekke HR, Kolberg M, Skotheim RI, Hall KS, Bjerkehagen B, Risberg B, Domanski HA, Mandahl N, Liestøl K, Smeland S, Danielsen HE, Mertens F, Lothe RA (2009)
   Identification of p53 as a strong predictor of survival for patients with malignant peripheral nerve sheath tumors
   Neuro Oncol, 11 (5), 514-28
   PubMed 19182148
8. Cekaite L, Hovig E, Sioud M (2009)
   Monitoring B cell response to immunoselected phage-displayed peptides by microarrays
   Methods Mol Biol, 524, 273-85
   PubMed 19377952
9. Dahlback HS, Brandal P, Meling TR, Gorunova L, Scheie D, Heim S (2009)
   Genomic aberrations in 80 cases of primary glioblastoma multiforme: Pathogenetic heterogeneity and putative cytogenetic pathways
   Genes Chromosomes Cancer, 48 (10), 908-24
   PubMed 19603525
10. Danielsen SA, Lind GE, Biornslett M, Meling GI, Rognum TO, Heim S, Lothe RA (2009)
    Novel Mutations of the Suppressor Gene PTEN in Colorectal Carcinomas Stratified by Microsatellite Instability- and TP53 Mutation- Status (vol 29, pg E252, 2008)
    Hum. Mutat., 30 (6), 1023
11. Dong HP, Holth A, Kleinberg L, Ruud MG, Elstrand MB, Tropé CG, Davidson B, Risberg B (2009)
    Evaluation of cell surface expression of phosphatidylserine in ovarian carcinoma effusions using the annexin-V/7-AAD assay: clinical relevance and comparison with other apoptosis parameters
    Am J Clin Pathol, 132 (5), 756-62
    PubMed 19846818
12. Gebre-Medhin S, Broberg K, Jonson T, Gorunova L, von Steyern FV, Brosjö O, Jin Y, Gisselsson D, Panagopoulos I, Mandahl N, Mertens F (2009)
    Telomeric associations correlate with telomere length reduction and clonal chromosome aberrations in giant cell tumor of bone
    Cytogenet Genome Res, 124 (2), 121-7
    PubMed 19420923
13. Gorunova L, Vult von Steyern F, Storlazzi CT, Bjerkehagen B, Follerås G, Heim S, Mandahl N, Mertens F (2009)
    Cytogenetic analysis of 101 giant cell tumors of bone: nonrandom patterns of telomeric associations and other structural aberrations
    Genes Chromosomes Cancer, 48 (7), 583-602
    PubMed 19396867
14. Holla ØL, Nakken S, Mattingsdal M, Ranheim T, Berge KE, Defesche JC, Leren TP (2009)
    Effects of intronic mutations in the LDLR gene on pre-mRNA splicing: Comparison of wet-lab and bioinformatics analyses
    Mol Genet Metab, 96 (4), 245-52
    PubMed 19208450
15. Holm R, Ali T, Svendsrud DH, Nesland JM, Kristensen GB, Lyng H (2009)
    Expression of 14-3-3sigma in cervical squamous cell carcinomas: relationship with clinical outcome
    Oncol Rep, 22 (1), 11-5
    PubMed 19513498
16. Karrman K, Forestier E, Heyman M, Andersen MK, Autio K, Blennow E, Borgström G, Ehrencrona H, Golovleva I, Heim S, Heinonen K, Hovland R, Johannsson JH, Kerndrup G, Nordgren A, Palmqvist L, Johansson B, Nordic Society of Pediatric Hematology, Oncology (NOPHO), Swedish Cytogenetic Leukemia Study Group (SCLSG), NOPHO Leukemia Cytogenetic Study Group (NLCSG) (2009)
    Clinical and cytogenetic features of a population-based consecutive series of 285 pediatric T-cell acute lymphoblastic leukemias: rare T-cell receptor gene rearrangements are associated with poor outcome
    Genes Chromosomes Cancer, 48 (9), 795-805
    PubMed 19530250
17. Kildal W, Abeler VM, Kristensen GB, Jenstad M, Thoresen SØ, Danielsen HE (2009)
    The prognostic value of DNA ploidy in a total population of uterine sarcomas
    Ann Oncol, 20 (6), 1037-41
    PubMed 19201782
18. Kildal W, Pradhan M, Abeler VM, Kristensen GB, Danielsen HE (2009)
    Beta-catenin expression in uterine sarcomas and its relation to clinicopathological parameters
    Eur J Cancer, 45 (13), 2412-7
    PubMed 19622417
19. Kleinberg L, Dong HP, Holth A, Risberg B, Trope' CG, Nesland JM, Flørenes VA, Davidson B (2009)
    Cleaved caspase-3 and nuclear factor-kappaB p65 are prognostic factors in metastatic serous ovarian carcinoma
    Hum Pathol, 40 (6), 795-806
    PubMed 19157506
20. Lando M, Holden M, Bergersen LC, Svendsrud DH, Stokke T, Sundfør K, Glad IK, Kristensen GB, Lyng H (2009)
    Gene dosage, expression, and ontology analysis identifies driver genes in the carcinogenesis and chemoradioresistance of cervical cancer
    PLoS Genet, 5 (11), e1000719
    PubMed 19911042
21. Lehne G, Grasmo-Wendler UH, Berner JM, Meza-Zepeda LA, Adamsen BL, Flack A, Reiner A, Clausen OP, Hovig E, Myklebost O (2009)
    Upregulation of stem cell genes in multidrug resistant K562 leukemia cells
    Leuk Res, 33 (10), 1379-85
    PubMed 19394083
22. Micci F, Haugom L, Ahlquist T, Abeler VM, Trope CG, Lothe RA, Heim S (2009)
    Tumor spreading to the contralateral ovary in bilateral ovarian carcinoma is a late event in clonal evolution
    J Oncol, 2010, 646340
    PubMed 19759843
23. Micci F, Panagopoulos I, Haugom L, Andersen HK, Tjønnfjord GE, Beiske K, Heim S (2009)
    t(3;21)(q22;q22) leading to truncation of the RYK gene in atypical chronic myeloid leukemia
    Cancer Lett, 277 (2), 205-11
    PubMed 19168282
24. Micci F, Weimer J, Haugom L, Skotheim RI, Grunewald R, Abeler VM, Silins I, Lothe RA, Trope CG, Arnold N, Heim S (2009)
    Reverse painting of microdissected chromosome 19 markers in ovarian carcinoma identifies a complex rearrangement map
    Genes Chromosomes Cancer, 48 (2), 184-93
    PubMed 18973136
25. Murph MM, Liu W, Yu S, Lu Y, Hall H, Hennessy BT, Lahad J, Schaner M, Helland A, Kristensen G, Børresen-Dale AL, Mills GB (2009)
    Lysophosphatidic acid-induced transcriptional profile represents serous epithelial ovarian carcinoma and worsened prognosis
    PLoS One, 4 (5), e5583
    PubMed 19440550
26. Nakken S, Rognes T, Hovig E (2009)
    The disruptive positions in human G-quadruplex motifs are less polymorphic and more conserved than their neutral counterparts
    Nucleic Acids Res, 37 (17), 5749-56
    PubMed 19617376
27. Nakken S, Rødland EA, Rognes T, Hovig E (2009)
    Large-scale inference of the point mutational spectrum in human segmental duplications
    BMC Genomics, 10, 43
    PubMed 19161616
28. Norum OJ, Bruland ØS, Gorunova L, Berg K (2009)
    Photochemical internalization of bleomycin before external-beam radiotherapy improves locoregional control in a human sarcoma model
    Int J Radiat Oncol Biol Phys, 75 (3), 878-85
    PubMed 19665318
29. Nygaard V, Hovig E (2009)
    Methods for quantitation of gene expression
    Front Biosci, 14, 552-69
    PubMed 19273085
30. Pradhan M, Davidson B, Tropé CG, Danielsen HE, Abeler VM, Risberg B (2009)
    Gross genomic alterations differ between serous borderline tumors and serous adenocarcinomas--an image cytometric DNA ploidy analysis of 307 cases with histogenetic implications
    Virchows Arch, 454 (6), 677-83
    PubMed 19421773
31. Pretorius ME, Waehre H, Abeler VM, Davidson B, Vlatkovic L, Lothe RA, Giercksky KE, Danielsen HE (2009)
    Large scale genomic instability as an additive prognostic marker in early prostate cancer
    Cell Oncol, 31 (4), 251-9
    PubMed 19633362
32. Rud AK, Bjørgo S, Kristensen GB, Kongsgaard UE (2009)
    Hyperbaric oxygen therapy for late radiation tissue injury in gynaecological patients
    Support Care Cancer, 17 (12), 1517-21
    PubMed 19319575
33. Skotheim RI, Thomassen GO, Eken M, Lind GE, Micci F, Ribeiro FR, Cerveira N, Teixeira MR, Heim S, Rognes T, Lothe RA (2009)
    A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis
    Mol Cancer, 8, 5
    PubMed 19152679
34. Thingnes J, Oyehaug L, Hovig E, Omholt SW (2009)
    The mathematics of tanning
    BMC Syst Biol, 3, 60
    PubMed 19505344
35. Tøstesen E, Sandve GK, Liu F, Hovig E (2009)
    Segmentation of DNA sequences into twostate regions and melting fork regions
    J Phys Condens Matter, 21 (3), 034109
    PubMed 21817254
36. Vistad I, Kristensen GB, Fosså SD, Dahl AA, Mørkrid L (2009)
    Intestinal malabsorption in long-term survivors of cervical cancer treated with radiotherapy
    Int J Radiat Oncol Biol Phys, 73 (4), 1141-7
    PubMed 18760883
37. Wangensteen T, Kolsgaard ML, Mattingsdal M, Joner G, Tonstad S, Undlien D, Retterstol L (2009)
    Mutations in the melanocortin 4 receptor (MC4R) gene in obese patients in Norway
    Exp Clin Endocrinol Diabetes, 117 (6), 266-73
    PubMed 19301229

Publications 2008

1. Akbari A, Marthinsen G, Lifjeld JT, Albregtsen F, Wennerberg L, Stenseth NC, Jakobsen KS (2008)
   Improved DNA fragment length estimation in capillary electrophoresis
   Electrophoresis, 29 (6), 1273-85
   PubMed 18288778
2. Arnoldussen YJ, Lorenzo PI, Pretorius ME, Waehre H, Risberg B, Maelandsmo GM, Danielsen HE, Saatcioglu F (2008)
   The mitogen-activated protein kinase phosphatase vaccinia H1-related protein inhibits apoptosis in prostate cancer cells and is overexpressed in prostate cancer
   Cancer Res, 68 (22), 9255-64
   PubMed 19010898
3. Brandal P, Panagopoulos I, Bjerkehagen B, Gorunova L, Skjeldal S, Micci F, Heim S (2008)
   Detection of a t(1;22)(q23;q12) translocation leading to an EWSR1-PBX1 fusion gene in a myoepithelioma
   Genes Chromosomes Cancer, 47 (7), 558-64
   PubMed 18383210
4. Cerveira N, Micci F, Santos J, Pinheiro M, Correia C, Lisboa S, Bizarro S, Norton L, Glomstein A, Asberg AE, Heim S, Teixeira MR (2008)
   Molecular characterization of the MLL-SEPT6 fusion gene in acute myeloid leukemia: identification of novel fusion transcripts and cloning of genomic breakpoint junctions
   Haematologica, 93 (7), 1076-80
   PubMed 18492691
5. Danielsen SA, Lind GE, Bjørnslett M, Meling GI, Rognum TO, Heim S, Lothe RA (2008)
   Novel mutations of the suppressor gene PTEN in colorectal carcinomas stratified by microsatellite instability- and TP53 mutation- status
   Hum Mutat, 29 (11), E252-62
   PubMed 18781614
6. Davidson B, Dong HP, Holth A, Berner A, Risberg B (2008)
   The chemokine receptor CXCR4 is more frequently expressed in breast compared to other metastatic adenocarcinomas in effusions
   Breast J, 14 (5), 476-82
   PubMed 18657145
7. Davidson B, Hadar R, Schlossberg A, Sternlicht T, Slipicevic A, Skrede M, Risberg B, Flørenes VA, Kopolovic J, Reich R (2008)
   Expression and clinical role of DJ-1, a negative regulator of PTEN, in ovarian carcinoma
   Hum Pathol, 39 (1), 87-95
   PubMed 17949781
8. Dong HP, Kleinberg L, Davidson B, Risberg B (2008)
   Methods for simultaneous measurement of apoptosis and cell surface phenotype of epithelial cells in effusions by flow cytometry
   Nat Protoc, 3 (6), 955-64
   PubMed 18546596
9. Dong HP, Kleinberg L, Silins I, Flørenes VA, Tropé CG, Risberg B, Nesland JM, Davidson B (2008)
   Death receptor expression is associated with poor response to chemotherapy and shorter survival in metastatic ovarian carcinoma
   Cancer, 112 (1), 84-93
   PubMed 17985388
10. Forestier E, Gauffin F, Andersen MK, Autio K, Borgström G, Golovleva I, Gustafsson B, Heim S, Heinonen K, Heyman M, Hovland R, Johannsson JH, Kerndrup G, Rosenquist R, Schoumans J, Swolin B, Johansson B, Nordgren A, Nordic Society of Pediatric Hematology and Oncology, Swedish Cytogenetic Leukemia Study Group, NOPHO Leukemia Cytogenetic Study Group (2008)
    Clinical and cytogenetic features of pediatric dic(9;20)(p13.2;q11.2)-positive B-cell precursor acute lymphoblastic leukemias: a Nordic series of 24 cases and review of the literature
    Genes Chromosomes Cancer, 47 (2), 149-58
    PubMed 17990329
11. Forestier E, Heyman M, Andersen MK, Autio K, Blennow E, Borgström G, Golovleva I, Heim S, Heinonen K, Hovland R, Johannsson JH, Kerndrup G, Nordgren A, Rosenquist R, Swolin B, Johansson B, Nordic Society of Paediatric Haematology, Oncology (NOPHO), Swedish Cytogenetic Leukaemia Study Group (SCLSG), NOPHO Leukaemia Cytogenetic Study Group (NLCSG) (2008)
    Outcome of ETV6/RUNX1-positive childhood acute lymphoblastic leukaemia in the NOPHO-ALL-1992 protocol: frequent late relapses but good overall survival
    Br J Haematol, 140 (6), 665-72
    PubMed 18241254
12. Heim S, Mitelman F (2008)
    Molecular screening for new fusion genes in cancer
    Nat Genet, 40 (6), 685-6
    PubMed 18509307
13. Holm R, de Putte GV, Suo Z, Lie AK, Kristensen GB (2008)
    Expressions of EphA2 and EphrinA-1 in early squamous cell cervical carcinomas and their relation to prognosis
    Int J Med Sci, 5 (3), 121-6
    PubMed 18566674
14. Holm R, Kraus I, Skomedal H, Langerød A, Kristensen GB, Lyng H (2008)
    Human papillomavirus DNA and e6/e7 mRNA status in relation to survival of patients treated for cervical squamous cell carcinoma
    Open Virol J, 2, 74-81
    PubMed 19440467
15. Kleinberg L, Pradhan M, Tropé CG, Nesland JM, Davidson B, Risberg B (2008)
    Ovarian carcinoma cells in effusions show increased S-phase fraction compared to corresponding primary tumors
    Diagn Cytopathol, 36 (9), 637-44
    PubMed 18677760
16. Kraus I, Driesch C, Vinokurova S, Hovig E, Schneider A, von Knebel Doeberitz M, Dürst M (2008)
    The majority of viral-cellular fusion transcripts in cervical carcinomas cotranscribe cellular sequences of known or predicted genes
    Cancer Res, 68 (7), 2514-22
    PubMed 18381461
17. Lie AK, Kristensen G (2008)
    Human papillomavirus E6/E7 mRNA testing as a predictive marker for cervical carcinoma
    Expert Rev Mol Diagn, 8 (4), 405-15
    PubMed 18598223
18. Lyng H, Lando M, Brøvig RS, Svendsrud DH, Johansen M, Galteland E, Brustugun OT, Meza-Zepeda LA, Myklebost O, Kristensen GB, Hovig E, Stokke T (2008)
    GeneCount: genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data
    Genome Biol, 9 (5), R86
    PubMed 18500990
19. Meza-Zepeda LA, Noer A, Dahl JA, Micci F, Myklebost O, Collas P (2008)
    High-resolution analysis of genetic stability of human adipose tissue stem cells cultured to senescence
    J Cell Mol Med, 12 (2), 553-63
    PubMed 18419597
20. Micci F, Haugom L, Abeler VM, Tropé CG, Danielsen HE, Heim S (2008)
    Consistent numerical chromosome aberrations in thecofibromas of the ovary
    Virchows Arch, 452 (3), 269-76
    PubMed 18188592
21. Nielsen B, Albregtsen F, Danielsen HE (2008)
    Statistical nuclear texture analysis in cancer research: a review of methods and applications
    Crit Rev Oncog, 14 (2-3), 89-164
    PubMed 19409060
22. Nygaard V, Liu F, Holden M, Kuo WP, Trimarchi J, Ohno-Machado L, Cepko CL, Frigessi A, Glad IK, Wiel MA, Hovig E, Lyng H (2008)
    Validation of oligoarrays for quantitative exploration of the transcriptome
    BMC Genomics, 9, 258
    PubMed 18513391
23. Ranheim T, Mattingsdal M, Lindvall JM, Holla OL, Berge KE, Kulseth MA, Leren TP (2008)
    Genome-wide expression analysis of cells expressing gain of function mutant D374Y-PCSK9
    J Cell Physiol, 217 (2), 459-67
    PubMed 18570182
24. Rødland EK, Mattingsdal M, Olstad OK, Ovstebø R, Kierulf P, Muller F, Frøland SS (2008)
    Expression of genes in normal human monocytes in response to Aspergillus fumigatus
    Med Mycol, 46 (4), 327-36
    PubMed 18415839
25. Vistad I, Cvancarova M, Fosså SD, Kristensen GB (2008)
    Postradiotherapy morbidity in long-term survivors after locally advanced cervical cancer: how well do physicians' assessments agree with those of their patients?
    Int J Radiat Oncol Biol Phys, 71 (5), 1335-42
    PubMed 18355976

Publications 2007

1. Benson M, Steenhoff Hov DA, Clancy T, Hovig E, Rudemo M, Cardell LO (2007)
   Connectivity can be used to identify key genes in DNA microarray data: a study based on gene expression in nasal polyps before and after treatment with glucocorticoids
   Acta Otolaryngol, 127 (10), 1074-9
   PubMed 17851899
2. Cekaite L, Furset G, Hovig E, Sioud M (2007)
   Gene expression analysis in blood cells in response to unmodified and 2'-modified siRNAs reveals TLR-dependent and independent effects
   J Mol Biol, 365 (1), 90-108
   PubMed 17054988
3. Davidson B, Dong HP, Holth A, Berner A, Risberg B (2007)
   Flow cytometric immunophenotyping of cancer cells in effusion specimens: diagnostic and research applications
   Diagn Cytopathol, 35 (9), 568-78
   PubMed 17703449
4. Davidson B, Dong HP, Holth A, Berner A, Risberg B (2007)
   Chemokine receptors are infrequently expressed in malignant and benign mesothelial cells
   Am J Clin Pathol, 127 (5), 752-9
   PubMed 17439834
5. Davidson B, Shafat I, Risberg B, Ilan N, Trope' CG, Vlodavsky I, Reich R (2007)
   Heparanase expression correlates with poor survival in metastatic ovarian carcinoma
   Gynecol Oncol, 104 (2), 311-9
   PubMed 17030350
6. Dong HP, Holth A, Berner A, Davidson B, Risberg B (2007)
   Flow cytometric immunphenotyping of epithelial cancer cells in effusions--technical considerations and pitfalls
   Cytometry B Clin Cytom, 72 (5), 332-43
   PubMed 17226863
7. Forestier E, Andersen MK, Autio K, Blennow E, Borgström G, Golovleva I, Heim S, Heinonen K, Hovland R, Johannsson JH, Kerndrup G, Nordgren A, Rosenquist R, Swolin B, Johansson B, Nordic Society of Pediatric Hematology and Oncology (NOPHO), Swedish Cytogenetic Leukemia Study Group (SCLSG), NOPHO Leukemia Cytogenetic Study Group (NLCSG) (2007)
   Cytogenetic patterns in ETV6/RUNX1-positive pediatric B-cell precursor acute lymphoblastic leukemia: A Nordic series of 245 cases and review of the literature
   Genes Chromosomes Cancer, 46 (5), 440-50
   PubMed 17285576
8. Hallor KH, Micci F, Meis-Kindblom JM, Kindblom LG, Bacchini P, Mandahl N, Mertens F, Panagopoulos I (2007)
   Fusion genes in angiomatoid fibrous histiocytoma
   Cancer Lett, 251 (1), 158-63
   PubMed 17188428
9. Ikonomou IM, Aamot HV, Heim S, Fosså A, Delabie J (2007)
   Granulomatous slack skin with a translocation t(3;9)(q12;p24)
   Am J Surg Pathol, 31 (5), 803-6
   PubMed 17460466
10. Klokk TI, Kilander A, Xi Z, Waehre H, Risberg B, Danielsen HE, Saatcioglu F (2007)
    Kallikrein 4 is a proliferative factor that is overexpressed in prostate cancer
    Cancer Res, 67 (11), 5221-30
    PubMed 17545602
11. Liu F, Jenssen TK, Trimarchi J, Punzo C, Cepko CL, Ohno-Machado L, Hovig E, Kuo WP (2007)
    Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates
    BMC Genomics, 8, 153
    PubMed 17555589
12. Liu F, Tøstesen E, Sundet JK, Jenssen TK, Bock C, Jerstad GI, Thilly WG, Hovig E (2007)
    The human genomic melting map
    PLoS Comput Biol, 3 (5), e93
    PubMed 17511513
13. Lyng H, Sitter B, Bathen TF, Jensen LR, Sundfør K, Kristensen GB, Gribbestad IS (2007)
    Metabolic mapping by use of high-resolution magic angle spinning 1H MR spectroscopy for assessment of apoptosis in cervical carcinomas
    BMC Cancer, 7, 11
    PubMed 17233882
14. McLaughlin JR, Risch HA, Lubinski J, Moller P, Ghadirian P, Lynch H, Karlan B, Fishman D, Rosen B, Neuhausen SL, Offit K, Kauff N, Domchek S, Tung N, Friedman E, Foulkes W, Sun P, Narod SA, Hereditary Ovarian Cancer Clinical Study Group (2007)
    Reproductive risk factors for ovarian cancer in carriers of BRCA1 or BRCA2 mutations: a case-control study
    Lancet Oncol, 8 (1), 26-34
    PubMed 17196508
15. Micci F, Bjerkehagen B, Heim S (2007)
    Pairwise comparison of genomic imbalances between primary and recurrent well differentiated liposarcomas
    Cancer Genet Cytogenet, 178 (2), 163-7
    PubMed 17954275
16. Micci F, Haugom L, Abeler VM, Bjerkehagen B, Heim S (2007)
    Trisomy 7 in postoperative spindle cell nodules
    Cancer Genet Cytogenet, 174 (2), 147-50
    PubMed 17452257
17. Micci F, Heim S (2007)
    Pathogenetic mechanisms in endometrial stromal sarcoma
    Cytogenet Genome Res, 118 (2-4), 190-5
    PubMed 18000370
18. Micci F, Panagopoulos I, Tjønnfjord GE, Kolstad A, Delabie J, Beiske K, Heim S (2007)
    Molecular cytogenetic characterization of t(14;19)(q32;p13), a new recurrent translocation in B cell malignancies
    Virchows Arch, 450 (5), 559-65
    PubMed 17406891
19. Pradhan M, Abeler VM, Danielsen HE, Risberg B (2007)
    A distinct pattern in the DNA ploidy histograms of hydatidiform moles and nonmolar abortuses is caused by accumulation of trophoblasts in the late s-phase
    Int J Gynecol Pathol, 26 (4), 432-6
    PubMed 17885494
20. Stormorken AT, Clark N, Grindedal E, Maehle L, Møller P (2007)
    Prevention of colorectal cancer by colonoscopic surveillance in families with hereditary colorectal cancer
    Scand J Gastroenterol, 42 (5), 611-7
    PubMed 17454882
21. Sudbo J, Bryne M, Mao L, Lotan R, Reith A, Kildal W, Davidson B, Soland TM, Lippman SM (2007)
    Molecular based treatment of oral cancer (Retraction of vol 39, pg 749, 2003)
    Oral Oncol., 43 (4), 421
22. Sudbo J, Ried T, Bryne M, Kildal W, Danielsen H, Reith A (2007)
    Abnormal DNA content predicts the occurrence of carcinomas in non-dysplastic oral white patches (Retraction of vol 37, pg 558, 2001)
    Oral Oncol., 43 (4), 418
23. Sudbo J, Ristimaki A, Sondresen JE, Kildal W, Boysen M, Koppang HS, Reith A, Risberg B, Nesland JM, Bryne M (2007)
    Cyclooxygenase-2 (COX-2) expression in high-risk premalignant oral lesions (Retraction of vol 39, pg 497, 2003)
    Oral Oncol., 43 (4), 420
24. Torres L, Ribeiro FR, Pandis N, Andersen JA, Heim S, Teixeira MR (2007)
    Intratumor genomic heterogeneity in breast cancer with clonal divergence between primary carcinomas and lymph node metastases
    Breast Cancer Res Treat, 102 (2), 143-55
    PubMed 16906480
25. Trimble EL, Davis J, Disaia P, Fujiwara K, Gaffney D, Kristensen G, Ledermann J, Pfisterer J, Quinn M, Reed N, Schoenfeldt M, Thigpen JT, Gynecologic Cancer Intergroup (2007)
    Clinical trials in gynecological cancer
    Int J Gynecol Cancer, 17 (3), 547-56
    PubMed 17504371
26. Vistad I, Fosså SD, Kristensen GB, Dahl AA (2007)
    Chronic fatigue and its correlates in long-term survivors of cervical cancer treated with radiotherapy
    BJOG, 114 (9), 1150-8
    PubMed 17655733
27. Vistad I, Fosså SD, Kristensen GB, Mykletun A, Dahl AA (2007)
    The sexual activity questionnaire: pychometric properties and normative data in a norwegian population sample
    J Womens Health (Larchmt), 16 (1), 139-48
    PubMed 17324105
28. Wang Y, Kristensen GB, Børresen-Dale AL, Helland A (2007)
    TP53 mutations and codon 72 genotype--impact on survival among ovarian cancer patients
    Ann Oncol, 18 (5), 964-6
    PubMed 17488735
29. Wu Q, Lind GE, Aasheim HC, Micci F, Silins I, Tropé CG, Nesland JM, Lothe RA, Suo Z (2007)
    The EPH receptor Bs (EPHBs) promoters are unmethylated in colon and ovarian cancers
    Epigenetics, 2 (4), 237-43
    PubMed 18281782
30. Wu Q, Lothe RA, Ahlquist T, Silins I, Tropé CG, Micci F, Nesland JM, Suo Z, Lind GE (2007)
    DNA methylation profiling of ovarian carcinomas and their in vitro models identifies HOXA9, HOXB5, SCGB3A1, and CRABP1 as novel targets
    Mol Cancer, 6, 45
    PubMed 17623056
31. Aamot HV, Torlakovic EE, Eide MB, Holte H, Heim S (2007)
    Non-Hodgkin lymphoma with t(14;18): clonal evolution patterns and cytogenetic-pathologic-clinical correlations
    J Cancer Res Clin Oncol, 133 (7), 455-70
    PubMed 17235551

Publications 2006

1. Berner JM, Muller CR, Holden M, Wang J, Hovig E, Myklebost O (2006)
   Sampling effects on gene expression data from a human tumour xenograft
   Scand. J. Lab. Anim. Sci., 33 (1), 17-30
2. Brandal P, Bjerkehagen B, Heim S (2006)
   Rearrangement of chromosomal region 8q11-13 in lipomatous tumours: correlation with lipoblastoma morphology
   J Pathol, 208 (3), 388-94
   PubMed 16308870
3. Brandal P, Lie AK, Bassarova A, Svindland A, Risberg B, Danielsen H, Heim S (2006)
   Genomic aberrations in mucinous tubular and spindle cell renal cell carcinomas
   Mod Pathol, 19 (2), 186-94
   PubMed 16258504
4. Brennhovd B, Johnsrud K, Berner A, Bogsrud T, Waehre H, Giercksky KE, Axcrona K (2006)
   Sentinel node procedure in low-stage/low-grade penile carcinomas
   Scand J Urol Nephrol, 40 (3), 204-7
   PubMed 16809260
5. Bøe S, Hovig E (2006)
   Photochemically induced gene silencing using PNA-peptide conjugates
   Oligonucleotides, 16 (2), 145-57
   PubMed 16764538
6. Clausen OP, Aass HC, Beigi M, Purdie KJ, Proby CM, Brown VL, Mattingsdal M, Micci F, Kølvraa S, Bolund L, Deangelis PM (2006)
   Are keratoacanthomas variants of squamous cell carcinomas? A comparison of chromosomal aberrations by comparative genomic hybridization
   J Invest Dermatol, 126 (10), 2308-15
   PubMed 16728973
7. Davidson B, Risberg B, Berner A, Bedrossian CW, Reich R (2006)
   The biological differences between ovarian serous carcinoma and diffuse peritoneal malignant mesothelioma
   Semin Diagn Pathol, 23 (1), 35-43
   PubMed 17044194
8. Dong HP, Elstrand MB, Holth A, Silins I, Berner A, Trope CG, Davidson B, Risberg B (2006)
   NK- and B-cell infiltration correlates with worse outcome in metastatic ovarian carcinoma
   Am J Clin Pathol, 125 (3), 451-8
   PubMed 16613351
9. Friedman E, Kotsopoulos J, Lubinski J, Lynch HT, Ghadirian P, Neuhausen SL, Isaacs C, Weber B, Foulkes WD, Moller P, Rosen B, Kim-Sing C, Gershoni-Baruch R, Ainsworth P, Daly M, Tung N, Eisen A, Olopade OI, Karlan B, Saal HM, Garber JE, Rennert G, Gilchrist D, Eng C, Offit K et al. (2006)
   Spontaneous and therapeutic abortions and the risk of breast cancer among BRCA mutation carriers
   Breast Cancer Res, 8 (2), R15
   PubMed 16563180
10. Geirdal AØ, Maehle L, Heimdal K, Stormorken A, Møller P, Dahl AA (2006)
    Quality of life and its relation to cancer-related stress in women of families with hereditary cancer without demonstrated mutation
    Qual Life Res, 15 (3), 461-70
    PubMed 16547785
11. Ikonomou IM, Tierens A, Troen G, Aamot HV, Heim S, Lauritzsen GF, Vålerhaugen H, Delabie J (2006)
    Peripheral T-cell lymphoma with involvement of the expanded mantle zone
    Virchows Arch, 449 (1), 78-87
    PubMed 16633785
12. Karrman K, Forestier E, Andersen MK, Autio K, Borgström G, Heim S, Heinonen K, Hovland R, Kerndrup G, Johansson B, Nordic Society of Paediatric Haematology and Oncology (NOPHO) and the NOPHO Leukaemia Cytogenetic Study Group (NLCSG) (2006)
    High incidence of the ETV6/RUNX1 fusion gene in paediatric precursor B-cell acute lymphoblastic leukaemias with trisomy 21 as the sole cytogenetic change: a Nordic series of cases diagnosed 1989-2005
    Br J Haematol, 135 (3), 352-4
    PubMed 16965388
13. Kotsopoulos J, Lubinski J, Neuhausen SL, Lynch HT, Rosen B, Ainsworth P, Moller P, Ghadirian P, Isaacs C, Karlan B, Sun P, Narod SA (2006)
    Hormone replacement therapy and the risk of ovarian cancer in BRCA1 and BRCA2 mutation carriers
    Gynecol Oncol, 100 (1), 83-8
    PubMed 16137751
14. Kuo WP, Liu F, Trimarchi J, Punzo C, Lombardi M, Sarang J, Whipple ME, Maysuria M, Serikawa K, Lee SY, McCrann D, Kang J, Shearstone JR, Burke J, Park DJ, Wang X, Rector TL, Ricciardi-Castagnoli P, Perrin S, Choi S, Bumgarner R, Kim JH, Short GF, Freeman MW, Seed B et al. (2006)
    A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies
    Nat Biotechnol, 24 (7), 832-40
    PubMed 16823376
15. Lilleby W, Hernes E, Waehre H, Raabe N, Fosså SD (2006)
    [Treatment of hormone-resistant prostate cancer]
    Tidsskr Nor Laegeforen, 126 (21), 2798-801
    PubMed 17086220
16. Lyng H, Brøvig RS, Svendsrud DH, Holm R, Kaalhus O, Knutstad K, Oksefjell H, Sundfør K, Kristensen GB, Stokke T (2006)
    Gene expressions and copy numbers associated with metastatic phenotypes of uterine cervical cancer
    BMC Genomics, 7, 268
    PubMed 17054779
17. Micci F, Panagopoulos I, Bjerkehagen B, Heim S (2006)
    Consistent rearrangement of chromosomal band 6p21 with generation of fusion genes JAZF1/PHF1 and EPC1/PHF1 in endometrial stromal sarcoma
    Cancer Res, 66 (1), 107-12
    PubMed 16397222
18. Micci F, Panagopoulos I, Bjerkehagen B, Heim S (2006)
    Deregulation of HMGA2 in an aggressive angiomyxoma with t(11;12)(q23;q15)
    Virchows Arch, 448 (6), 838-42
    PubMed 16568309
19. Narod SA, Lubinski J, Ghadirian P, Lynch HT, Moller P, Foulkes WD, Rosen B, Kim-Sing C, Isaacs C, Domchek S, Sun P, Hereditary Breast Cancer Clinical Study Group (2006)
    Screening mammography and risk of breast cancer in BRCA1 and BRCA2 mutation carriers: a case-control study
    Lancet Oncol, 7 (5), 402-6
    PubMed 16648044
20. Nielsen B, Danielsen HE (2006)
    Prognostic value of adaptive textural features--the effect of standardizing nuclear first-order gray level statistics and mixing information from nuclei having different area
    Cell Oncol, 28 (3), 85-95
    PubMed 16823177
21. Nygaard V, Hovig E (2006)
    Options available for profiling small samples: a review of sample amplification technology when combined with microarray profiling
    Nucleic Acids Res, 34 (3), 996-1014
    PubMed 16473852
22. Oldenburg J, Alfsen GC, Waehre H, Fosså SD (2006)
    Late recurrences of germ cell malignancies: a population-based experience over three decades
    Br J Cancer, 94 (6), 820-7
    PubMed 16508636
23. Pradhan M, Abeler VM, Danielsen HE, Tropé CG, Risberg BA (2006)
    Image cytometry DNA ploidy correlates with histological subtypes in endometrial carcinomas
    Mod Pathol, 19 (9), 1227-35
    PubMed 16729014
24. Prasmickaite L, Cekaite L, Hellum M, Hovig E, Høgset A, Berg K (2006)
    Transcriptome changes in a colon adenocarcinoma cell line in response to photochemical treatment as used in photochemical internalisation (PCI)
    FEBS Lett, 580 (24), 5739-46
    PubMed 17007842
25. Rocha AS, Risberg B, Magalhães J, Trovisco V, de Castro IV, Lazarovici P, Soares P, Davidson B, Sobrinho-Simões M (2006)
    The p75 neurotrophin receptor is widely expressed in conventional papillary thyroid carcinoma
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    A marginal zone phenotype in follicular lymphoma with t(14;18) is associated with secondary cytogenetic aberrations typical of marginal zone lymphoma
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