Ksenia Lavrichenko

  • Senior engineer; PhD

Ksenia Lavrichenko has a diverse background in bioinformatics, ranging from genomics (especially structural variation) to transcriptomics and phylogenetics. Throughout her journey in academia, she has gained experience in genetics, statistical genetics, neuroscience and molecular biology.

 

Publications 2024

Artaza H, Eriksson D, Lavrichenko K, Aranda-Guillén M, Bratland E, Vaudel M, Knappskog P, Husebye ES, Bensing S, Wolff ASB, Kämpe O, Røyrvik EC, Johansson S (2024)
Rare copy number variation in autoimmune Addison's disease
Front Immunol, 15, 1374499
DOI 10.3389/fimmu.2024.1374499, PubMed 38562931

Artaza H, Lavrichenko K, Wolff ASB, Røyrvik EC, Vaudel M, Johansson S (2024)
Rare copy number variant analysis in case-control studies using snp array data: a scalable and automated data analysis pipeline
BMC Bioinformatics, 25 (1), 357
DOI 10.1186/s12859-024-05979-0, PubMed 39548362

Publications 2022

Vernes SC, Devanna P, Hörpel SG, Alvarez van Tussenbroek I, Firzlaff U, Hagoort P, Hiller M, Hoeksema N, Hughes GM, Lavrichenko K, Mengede J, Morales AE, Wiesmann M (2022)
The pale spear-nosed bat: A neuromolecular and transgenic model for vocal learning
Ann N Y Acad Sci, 1517 (1), 125-142
DOI 10.1111/nyas.14884, PubMed 36069117

Publications 2021

Lavrichenko K, Helgeland Ø, Njølstad PR, Jonassen I, Johansson S (2021)
SeeCiTe: a method to assess CNV calls from SNP arrays using trio data
Bioinformatics, 37 (13), 1876-1883
DOI 10.1093/bioinformatics/btab028, PubMed 33459766

Lavrichenko K, Johansson S, Jonassen I (2021)
Comprehensive characterization of copy number variation (CNV) called from array, long- and short-read data
BMC Genomics, 22 (1), 826
DOI 10.1186/s12864-021-08082-3, PubMed 34789167

Publications 2020

Jebb D, Huang Z, Pippel M, Hughes GM, Lavrichenko K, Devanna P, Winkler S, Jermiin LS, Skirmuntt EC, Katzourakis A, Burkitt-Gray L, Ray DA, Sullivan KAM, Roscito JG, Kirilenko BM, Dávalos LM, Corthals AP, Power ML, Jones G, Ransome RD, Dechmann DKN, Locatelli AG, Puechmaille SJ, Fedrigo O, Jarvis ED et al. (2020)
Six reference-quality genomes reveal evolution of bat adaptations
Nature, 583 (7817), 578-584
DOI 10.1038/s41586-020-2486-3, PubMed 32699395

Smajlagić D, Lavrichenko K, Berland S, Helgeland Ø, Knudsen GP, Vaudel M, Haavik J, Knappskog PM, Njølstad PR, Houge G, Johansson S (2020)
Population prevalence and inheritance pattern of recurrent CNVs associated with neurodevelopmental disorders in 12,252 newborns and their parents
Eur J Hum Genet, 29 (1), 205-215
DOI 10.1038/s41431-020-00707-7, PubMed 32778765

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